1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G19330

AT4G19330


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0005233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005233_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G19330
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G61540 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.12 OrthoFinder output from all 47 species
AT3G08810 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.14 OrthoFinder output from all 47 species
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.16 OrthoFinder output from all 47 species
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G34170 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.17 OrthoFinder output from all 47 species
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.16 OrthoFinder output from all 47 species
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G39600 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G39750 No alias F-box family protein-related 0.16 OrthoFinder output from all 47 species
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.18 OrthoFinder output from all 47 species
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.2 OrthoFinder output from all 47 species
AT5G03010 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G28160 No alias Galactose oxidase/kelch repeat superfamily protein 0.16 OrthoFinder output from all 47 species
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009409 response to cold IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR025609 Lsm14-like_N 124 186
IPR025609 Lsm14-like_N 19 114
IPR001810 F-box_dom 178 219
IPR006652 Kelch_1 286 324
IPR006652 Kelch_1 326 370
No external refs found!