AT4G18770 (AtMYB98, MYB98)

Aliases : AtMYB98, MYB98

Description : myb domain protein 98

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18770
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272410	AtMYB98, MYB98,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AMTR_s00006p00225600	MYBR1, MYB44,...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AMTR_s00096p00076220	AtMYB98, MYB98,...	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
AT3G27785	PGA37, ATMYB118, MYB118	myb domain protein 118	0.04	OrthoFinder output from all 47 species
Aev_g39348	MYB3R-1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g03504	BW52, ATMYB52, MYB52	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g09398	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Als_g12553	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Als_g14437	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene54282.t1	MYB1, AtMYB1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0103.g044681	BW52, ATMYB52, MYB52	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Azfi_s3609.g116385	MYB73, ATMYB73	not classified & original description: CDS=1-897	0.03	OrthoFinder output from all 47 species
Dde_g12855	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
GSVIVT01020038001	MYB88, AtMYB88	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
GSVIVT01026481001	BW52, ATMYB52, MYB52	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
MA_373893g0010	AtMYB124, MYB124, FLP	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g26462	AtMYB98, MYB98	MYB class-R2R3 transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33238	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g11690	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.05	OrthoFinder output from all 47 species
Pnu_g27096	MYB88, AtMYB88	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Smo6091	AtMYB117, LOF1, MYB117	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Smo80553	BW52, ATMYB52, MYB52	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Solyc03g112890.1.1	AtMYB98, MYB98,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Solyc04g079360.1.1	MYB77, Solyc04g079360	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Spa_g07464	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Spa_g16917	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g48278	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006863	purine nucleobase transport	RCA	Interproscan
BP	GO:0006935	chemotaxis	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009553	embryo sac development	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010183	pollen tube guidance	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015851	nucleobase transport	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040011	locomotion	None	Extended
BP	GO:0042330	taxis	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045697	regulation of synergid differentiation	IMP	Interproscan
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050918	positive chemotaxis	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G18770 (AtMYB98, MYB98)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation