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  5. AT4G18670

AT4G18670


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18670

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.05 OrthoFinder output from all 47 species
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.07 OrthoFinder output from all 47 species
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.05 OrthoFinder output from all 47 species
AT2G19780 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Adi_g004980 LRX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18679 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03898 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g26231 LRX2 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Als_g39238 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05958 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g18349 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21090 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21238 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g61610 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene69387.t1 LRX2, Aspi01Gene69387 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.09 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.09 OrthoFinder output from all 47 species
Azfi_s0345.g065781 No alias LRR-domain extensin & original description: CDS=1-1542 0.03 OrthoFinder output from all 47 species
Azfi_s1965.g108394 No alias not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14310 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g55943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G022500.1 Ceric.16G022500 LRR-domain extensin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G069300.1 LRX2, Ceric.25G069300 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15319 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11931 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g13236 LRX2 LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g15033 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g47264 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18979 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31890 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031700001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Gb_10910 LRX2 LRR-domain extensin 0.07 OrthoFinder output from all 47 species
Gb_12380 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Gb_26318 No alias LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Gb_27021 LRX2 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Gb_29819 LRX2 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
LOC_Os01g08470.1 LOC_Os01g08470 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
LOC_Os01g41120.1 LOC_Os01g41120 LRR-domain extensin 0.08 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.07 OrthoFinder output from all 47 species
LOC_Os02g40260.1 LOC_Os02g40260 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.11 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.12 OrthoFinder output from all 47 species
LOC_Os06g49100.1 LRX2, LOC_Os06g49100 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Len_g05367 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24034 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38364 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
MA_179279g0010 No alias LRR-domain extensin 0.03 OrthoFinder output from all 47 species
MA_7188g0010 LRX2 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.04 OrthoFinder output from all 47 species
Msp_g06483 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07695 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g32219 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39205 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05430 LRX2 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16811 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19666 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g03283 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g47474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05847 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10314 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011513 No alias LRR-domain extensin & original description: CDS=1-1296 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.06 OrthoFinder output from all 47 species
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc12g088950.3.1 Solyc12g088950 Pollen-specific leucine-rich repeat extensin-like... 0.03 OrthoFinder output from all 47 species
Spa_g02389 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g05733 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06077 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g06078 No alias LRR-domain extensin & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g09054 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27071 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g33020 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37100 LRX2 LRR-domain extensin & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53147 LRX2 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02020 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005974_P001 Zm00001e005974 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Zm00001e007641_P001 Zm00001e007641 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011874_P001 Zm00001e011874 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e025924_P001 LRX2, Zm00001e025924 LRR-domain extensin 0.07 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e030216_P001 LRX2, Zm00001e030216 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e031217_P001 Zm00001e031217 Leucine-rich repeat extensin-like protein 4... 0.05 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall ISS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0001933 negative regulation of protein phosphorylation IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
CC GO:0009923 fatty acid elongase complex IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042326 negative regulation of phosphorylation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0050730 regulation of peptidyl-tyrosine phosphorylation IEP HCCA
BP GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071258 cellular response to gravity IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0080023 3R-hydroxyacyl-CoA dehydratase activity IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 84 116
IPR001611 Leu-rich_rpt 153 209
No external refs found!