Aliases : BMY8, BAM3, CT-BMY
Description : chloroplast beta-amylase
Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT4G17090 | |
Cluster | HCCA: Cluster_139 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00050p00205080 | BAM1, BMY7,... | Carbohydrate metabolism.starch... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g024852 | BMY5, BAM6 | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g082770 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01455 | BMY5, BAM6 | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g03909 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g05070 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g06607 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g18488 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g15788 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12842 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0319.g064428 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: CDS=328-2121 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.19G057400.1 | BAM1, BMY7,... | EC_3.2 glycosylase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g10032 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g13700 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g27805 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g05980 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g41550.1 | BMY8, BAM3,... | beta amylase | 0.03 | OrthoFinder output from all 47 species | |
Len_g08375 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g10304 | BMY5, BAM6 | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g19095 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g20100 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g22821 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_124514g0010 | BAM1, BMY7, TR-BAMY | beta amylase | 0.04 | OrthoFinder output from all 47 species | |
Msp_g13123 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g14099 | BAM1, BMY7, TR-BAMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g12697 | BMY8, BAM3, CT-BMY | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000024 | maltose biosynthetic process | IMP | Interproscan |
BP | GO:0005983 | starch catabolic process | IMP | Interproscan |
BP | GO:0005983 | starch catabolic process | TAS | Interproscan |
BP | GO:0009409 | response to cold | IEP | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
CC | GO:0009570 | chloroplast stroma | IDA | Interproscan |
MF | GO:0016161 | beta-amylase activity | IDA | Interproscan |
MF | GO:0016161 | beta-amylase activity | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000302 | response to reactive oxygen species | IEP | HCCA |
BP | GO:0001101 | response to acid chemical | IEP | HCCA |
MF | GO:0004310 | farnesyl-diphosphate farnesyltransferase activity | IEP | HCCA |
MF | GO:0004311 | farnesyltranstransferase activity | IEP | HCCA |
MF | GO:0004659 | prenyltransferase activity | IEP | HCCA |
MF | GO:0004805 | trehalose-phosphatase activity | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | HCCA |
MF | GO:0008378 | galactosyltransferase activity | IEP | HCCA |
BP | GO:0009269 | response to desiccation | IEP | HCCA |
BP | GO:0009414 | response to water deprivation | IEP | HCCA |
BP | GO:0009415 | response to water | IEP | HCCA |
CC | GO:0009527 | plastid outer membrane | IEP | HCCA |
CC | GO:0009707 | chloroplast outer membrane | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0009737 | response to abscisic acid | IEP | HCCA |
BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
BP | GO:0010039 | response to iron ion | IEP | HCCA |
MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | HCCA |
MF | GO:0015450 | protein-transporting ATPase activity | IEP | HCCA |
MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
MF | GO:0019203 | carbohydrate phosphatase activity | IEP | HCCA |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | HCCA |
MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
BP | GO:0033993 | response to lipid | IEP | HCCA |
MF | GO:0035250 | UDP-galactosyltransferase activity | IEP | HCCA |
BP | GO:0045037 | protein import into chloroplast stroma | IEP | HCCA |
MF | GO:0047216 | inositol 3-alpha-galactosyltransferase activity | IEP | HCCA |
BP | GO:0055072 | iron ion homeostasis | IEP | HCCA |
BP | GO:0097305 | response to alcohol | IEP | HCCA |
MF | GO:0140318 | protein transporter activity | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001554 | Glyco_hydro_14 | 89 | 506 |
No external refs found! |