AT4G16110 (RR2, ARR2)

Aliases : RR2, ARR2

Description : response regulator 2

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G16110

Target	Alias	Description	ECC score	Gene Family Method
AT3G62670	RR20, MEE41, ARR20	response regulator 20	0.03	OrthoFinder output from all 47 species
Adi_g080127	No alias	MYB-RELATED transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g12211	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g46457	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g12147	ARR11	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g44133	RR2, ARR2	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g13806	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25629	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene01000.t1	RR14, ARR14,...	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene28822.t1	RR2, ARR2,...	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31778.t2	RR12, ARR12,...	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001336.2	No alias	Two-component response regulator ARR1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dac_g02359	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g03329	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Dac_g15966	ARR11	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g18566	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g11896	ARR11	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26693	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_32182	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Lfl_g22323	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.04	OrthoFinder output from all 47 species
Msp_g02010	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g25181	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g26540	ARR11	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g02155	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g00463	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001234	RR12, ARR12	subgroup ARR-B transcription factor & original...	0.03	OrthoFinder output from all 47 species
Smo55684	ARR11	RNA biosynthesis.transcriptional activation.ARR-B...	0.03	OrthoFinder output from all 47 species
Tin_g01214	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g21279	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e018927_P001	ARR11, Zm00001e018927	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Zm00001e028539_P002	ARR11, Zm00001e028539	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Zm00001e036325_P002	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Zm00001e038688_P001	ARR1, RR1, Zm00001e038688	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	ISS	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IMP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IGI	Interproscan
BP	GO:0009735	response to cytokinin	IEP	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	RCA	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	TAS	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010029	regulation of seed germination	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010075	regulation of meristem growth	None	Extended
BP	GO:0010082	regulation of root meristem growth	IMP	Interproscan
BP	GO:0010119	regulation of stomatal movement	IMP	Interproscan
BP	GO:0010150	leaf senescence	IMP	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	RCA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048831	regulation of shoot system development	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071368	cellular response to cytokinin stimulus	IMP	Interproscan
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080113	regulation of seed growth	IMP	Interproscan
BP	GO:0090693	plant organ senescence	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
MF	GO:0004630	phospholipase D activity	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
CC	GO:0015630	microtubule cytoskeleton	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0016298	lipase activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0046473	phosphatidic acid metabolic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:0090333	regulation of stomatal closure	IEP	HCCA
BP	GO:1901419	regulation of response to alcohol	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA
BP	GO:1905957	regulation of cellular response to alcohol	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	218	268
IPR001789	Sig_transdc_resp-reg_receiver	30	138

External Links

No external refs found!

AT4G16110 (RR2, ARR2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation