Description : BEST Arabidopsis thaliana protein match is: embryo defective 1703 (TAIR:AT3G61780.1); Has 524 Blast hits to 443 proteins in 102 species: Archae - 0; Bacteria - 13; Metazoa - 196; Fungi - 37; Plants - 43; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Gene families : OG0025666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0025666_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT4G15820 | |
Cluster | HCCA: Cluster_77 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | RCA | Interproscan |
MF | GO:0003674 | molecular_function | ND | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0008150 | biological_process | ND | Interproscan |
BP | GO:0009086 | methionine biosynthetic process | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity | IEP | HCCA |
BP | GO:0007155 | cell adhesion | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
CC | GO:0009330 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex | IEP | HCCA |
BP | GO:0009741 | response to brassinosteroid | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0010026 | trichome differentiation | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
BP | GO:0033993 | response to lipid | IEP | HCCA |
BP | GO:0043687 | post-translational protein modification | IEP | HCCA |
BP | GO:0045010 | actin nucleation | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |