AT4G14920

Description : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein

Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G14920
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AT5G36740	No alias	Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc...	0.04	OrthoFinder output from all 47 species
Aev_g17243	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g20272	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g10962	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g29724	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13559	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g16245	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g31776	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g09002	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16965	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07944	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07958	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01014219001	No alias	RNA biosynthesis.transcriptional activation.PHD finger...	0.03	OrthoFinder output from all 47 species
LOC_Os03g53630.1	LOC_Os03g53630	PHD finger transcription factor	0.11	OrthoFinder output from all 47 species
Len_g17560	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01925	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g02467	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp6g21090.2	No alias	PHD finger transcription factor	0.03	OrthoFinder output from all 47 species
Ore_g18818	No alias	component *(IDM1) of ROS1-recruitment complex & original...	0.03	OrthoFinder output from all 47 species
Ore_g28861	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06867	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g35938	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g36270	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g15944	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc03g005170.3.1	Solyc03g005170	PHD finger transcription factor	0.07	OrthoFinder output from all 47 species
Solyc09g031580.3.1	Solyc09g031580	PHD finger transcription factor	0.02	OrthoFinder output from all 47 species
Solyc09g065340.3.1	Solyc09g065340	PHD finger transcription factor	0.03	OrthoFinder output from all 47 species
Spa_g50990	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g21039	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005667_P001	Zm00001e005667	PHD finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e012046_P003	Zm00001e012046	PHD finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	688	730
IPR032308	TDBD	575	647

External Links

No external refs found!

AT4G14920

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation