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  5. AT4G12050

AT4G12050


Description : Predicted AT-hook DNA-binding family protein


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G12050
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00189120 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 20... 0.08 OrthoFinder output from all 47 species
AMTR_s00011p00075410 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 16... 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00022450 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 24... 0.04 OrthoFinder output from all 47 species
AMTR_s00041p00025000 AHL22,... AT-hook motif nuclear-localized protein 24... 0.04 OrthoFinder output from all 47 species
AMTR_s00149p00093420 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 23... 0.05 OrthoFinder output from all 47 species
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 0.04 OrthoFinder output from all 47 species
AT4G35390 AGF1 AT-hook protein of GA feedback 1 0.03 OrthoFinder output from all 47 species
Adi_g055780 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058662 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058667 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113042 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38312 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22543 No alias AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g23177 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07099 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16583 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37574 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19817 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29083 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05839 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10801 GIK AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07381.t2 Aspi01Gene07381 AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene13410.t1 AHL22, Aspi01Gene13410 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14375.t1 Aspi01Gene14375 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18006.t1 HSP93-V, DCA1,... AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30094.t1 Aspi01Gene30094 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40424.t1 AHL22, Aspi01Gene40424 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65274.t1 AHL22, Aspi01Gene65274 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65278.t1 AHL22, Aspi01Gene65278 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67181.t1 Aspi01Gene67181 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000734 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010423 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015426 AHL22 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037284 No alias AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058469 No alias AHL clade-A transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g04471 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g53634 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71906 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G093400.1 Ceric.04G093400 AHL clade-A transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.1Z164900.1 Ceric.1Z164900 AHL clade-A transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.38G024400.1 GIK, Ceric.38G024400 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g01453 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05571 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25287 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25872 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42758 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06406 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03451 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05590 AHL20 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14619 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22290 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27436 No alias AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g31616 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013202001 No alias AT-hook motif nuclear-localized protein 23... 0.04 OrthoFinder output from all 47 species
GSVIVT01016497001 AHL15, AGF2 AT-hook motif nuclear-localized protein 15... 0.05 OrthoFinder output from all 47 species
GSVIVT01019932001 No alias AT-hook motif nuclear-localized protein 24... 0.04 OrthoFinder output from all 47 species
GSVIVT01036210001 AHL20 AT-hook motif nuclear-localized protein 19... 0.03 OrthoFinder output from all 47 species
Gb_15730 No alias AT-hook motif nuclear-localized protein 16... 0.03 OrthoFinder output from all 47 species
Gb_33065 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Gb_34320 AHL22 AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
LOC_Os02g25020.1 LOC_Os02g25020 AT-hook motif nuclear-localized protein 22... 0.06 OrthoFinder output from all 47 species
LOC_Os02g48320.3 AHL27, ORE7,... AT-hook motif nuclear-localized protein 25... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16350.1 AHL22, LOC_Os03g16350 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
LOC_Os04g50030.1 LOC_Os04g50030 AT-hook motif nuclear-localized protein 23... 0.08 OrthoFinder output from all 47 species
LOC_Os06g04540.1 LOC_Os06g04540 AT-hook motif nuclear-localized protein 24... 0.04 OrthoFinder output from all 47 species
LOC_Os06g22100.2 AHL22, LOC_Os06g22100 AT-hook motif nuclear-localized protein 24... 0.04 OrthoFinder output from all 47 species
LOC_Os08g06320.1 LOC_Os08g06320 AT-hook motif nuclear-localized protein 23... 0.1 OrthoFinder output from all 47 species
LOC_Os08g44910.1 AHL20, LOC_Os08g44910 AT-hook motif nuclear-localized protein 20... 0.05 OrthoFinder output from all 47 species
LOC_Os09g28930.1 LOC_Os09g28930 AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
Len_g37429 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_130452g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.06 OrthoFinder output from all 47 species
MA_19068g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
MA_19693g0010 AHL20 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_284g0020 AHL22 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
MA_291092g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
MA_41289g0010 GIK AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
MA_77661g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08085 AHL20 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12905 GIK AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28100 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29316 No alias AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g39566 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02087 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23418 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24840 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29204 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19085 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05346 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17799 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g20885 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05146 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12074 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15851 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g38879 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003721 AHL22 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005976 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo404546 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Smo57074 GIK AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Solyc01g091470.3.1 AHL22, Solyc01g091470 AT-hook motif nuclear-localized protein 22... 0.05 OrthoFinder output from all 47 species
Solyc06g060500.1.1 Solyc06g060500 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Solyc07g056300.1.1 Solyc07g056300 AT-hook motif nuclear-localized protein 16... 0.05 OrthoFinder output from all 47 species
Solyc08g007560.3.1 AHL22, Solyc08g007560 AT-hook motif nuclear-localized protein 22... 0.06 OrthoFinder output from all 47 species
Solyc08g077010.1.1 Solyc08g077010 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Solyc08g079720.3.1 AHL22, Solyc08g079720 AT-hook motif nuclear-localized protein 22... 0.07 OrthoFinder output from all 47 species
Solyc09g089620.1.1 AHL20, Solyc09g089620 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Solyc11g006090.3.1 AHL20, Solyc11g006090 AT-hook motif nuclear-localized protein 19... 0.04 OrthoFinder output from all 47 species
Solyc12g087950.1.1 Solyc12g087950 AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
Spa_g10063 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30290 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38567 AHL20 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00815 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01806 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10420 GIK AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007105_P001 Zm00001e007105 AT-hook motif nuclear-localized protein 23... 0.05 OrthoFinder output from all 47 species
Zm00001e021704_P001 Zm00001e021704 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e024863_P001 AHL22, Zm00001e024863 AT-hook motif nuclear-localized protein 23... 0.07 OrthoFinder output from all 47 species
Zm00001e036953_P001 AHL27, ORE7,... AT-hook motif nuclear-localized protein 21... 0.03 OrthoFinder output from all 47 species
Zm00001e041402_P001 Zm00001e041402 AT-hook motif nuclear-localized protein 21... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
CC GO:0009925 basal plasma membrane IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0010329 auxin efflux transmembrane transporter activity IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070417 cellular response to cold IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 146 260
No external refs found!