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AT4G11030


Description : AMP-dependent synthetase and ligase family protein


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G11030
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00179300 LRD2, LACS2,... Enzyme classification.EC_6 ligases.EC_6.2 ligase forming... 0.02 OrthoFinder output from all 47 species
Ala_g02292 ATLACS7, LACS7 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aob_g07873 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g14139 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017932001 LACS6, ATLACS6 Lipid metabolism.lipid degradation.fatty acid... 0.03 OrthoFinder output from all 47 species
Solyc08g008310.3.1 LACS4, Solyc08g008310 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IDA Interproscan
BP GO:0001676 long-chain fatty acid metabolic process RCA Interproscan
BP GO:0002213 defense response to insect RCA Interproscan
MF GO:0004467 long-chain fatty acid-CoA ligase activity IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006631 fatty acid metabolic process TAS Interproscan
BP GO:0006633 fatty acid biosynthetic process RCA Interproscan
BP GO:0006633 fatty acid biosynthetic process TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008553 P-type proton-exporting transporter activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 51 524
No external refs found!