1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G10790

AT4G10790


Description : UBX domain-containing protein


Gene families : OG0003017 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003017_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10790

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019629001 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Lfl_g24950 No alias substrate-to-CDC48 bridging factor *(PUX10) & original... 0.04 OrthoFinder output from all 47 species
MA_10427593g0010 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc08g008510.3.1 Solyc08g008510 Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006499 N-terminal protein myristoylation RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0048532 anatomical structure arrangement IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
InterPro domains Description Start Stop
IPR001012 UBX_dom 399 478
No external refs found!