Description : B-box zinc finger family protein
Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT4G10240 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00204180 | STO,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00182p00043350 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g06573 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g11974 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene09321.t1 | Aspi01Gene09321 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.17G005800.1 | STO, Ceric.17G005800 | BBX class-IV transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g25857 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g08980 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g43170.1 | LOC_Os02g43170 | transcription factor (BBX-DBB) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g31186 | STO | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g32457 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0029.g010219 | STO | BBX class-IV transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0084.g018285 | STO | BBX class-IV transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo444777 | STO | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g09563 | STO | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007388_P002 | STH2, Zm00001e007388 | transcription factor (BBX-DBB) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e007720_P001 | STO, Zm00001e007720 | transcription factor (BBX-DBB) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e022915_P001 | STO, Zm00001e022915 | transcription factor (BBX-DBB) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e041335_P001 | Zm00001e041335 | transcription factor (BBX-DBB) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002238 | response to molecule of fungal origin | IEP | HCCA |
BP | GO:0006825 | copper ion transport | IEP | HCCA |
BP | GO:0009556 | microsporogenesis | IEP | HCCA |
BP | GO:0009639 | response to red or far red light | IEP | HCCA |
BP | GO:0009641 | shade avoidance | IEP | HCCA |
BP | GO:0010017 | red or far-red light signaling pathway | IEP | HCCA |
BP | GO:0010345 | suberin biosynthetic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016630 | protochlorophyllide reductase activity | IEP | HCCA |
MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
BP | GO:0034293 | sexual sporulation | IEP | HCCA |
BP | GO:0043934 | sporulation | IEP | HCCA |
BP | GO:0048236 | plant-type sporogenesis | IEP | HCCA |
BP | GO:0048513 | animal organ development | IEP | HCCA |
MF | GO:0050062 | long-chain-fatty-acyl-CoA reductase activity | IEP | HCCA |
BP | GO:0051321 | meiotic cell cycle | IEP | HCCA |
BP | GO:0071478 | cellular response to radiation | IEP | HCCA |
BP | GO:0071482 | cellular response to light stimulus | IEP | HCCA |
BP | GO:0071489 | cellular response to red or far red light | IEP | HCCA |
MF | GO:0080019 | fatty-acyl-CoA reductase (alcohol-forming) activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000315 | Znf_B-box | 60 | 97 |
No external refs found! |