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  5. AT4G10190

AT4G10190


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10190
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G11810 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G31510 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G32140 No alias F-box family protein 0.11 OrthoFinder output from all 47 species
AT1G54550 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G59680 EDA1 F-box associated ubiquitination effector family protein 0.01 OrthoFinder output from all 47 species
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G67455 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT2G33655 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT2G38590 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT2G39355 No alias No description available 0.03 OrthoFinder output from all 47 species
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G08750 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G13680 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G13830 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT3G16020 No alias F-box associated ubiquitination effector protein 0.01 OrthoFinder output from all 47 species
AT3G16820 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G17265 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G17280 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G17320 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G17500 No alias F-box family protein 0.1 OrthoFinder output from all 47 species
AT3G17530 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G17560 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT3G18120 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT3G18330 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT3G19410 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from all 47 species
AT3G19470 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G19560 No alias F-box family protein 0.1 OrthoFinder output from all 47 species
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G19890 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT3G20030 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G20690 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT3G20710 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G22700 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT3G22710 No alias F-box family protein 0.01 OrthoFinder output from all 47 species
AT3G22720 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G22730 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT3G22770 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G22870 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G23680 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT3G44120 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G49520 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from all 47 species
AT4G09870 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT4G10740 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G36730 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G36820 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G41490 No alias F-box associated ubiquitination effector family protein 0.13 OrthoFinder output from all 47 species
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 6 45
IPR006527 F-box-assoc_dom_typ1 203 362
No external refs found!