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AT4G10000


Description : Thioredoxin family protein


Gene families : OG0002505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10000
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00115090 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00099p00023240 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
Aev_g30122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35991.t1 Aspi01Gene35991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40677.t1 Aspi01Gene40677 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G069600.1 Ceric.06G069600 not classified & original description: pacid=50619894... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021616.13 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g44400.1 LOC_Os08g44400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g02770.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g09140.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g19370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02768 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13227 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc09g009820.4.1 Solyc09g009820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g04178 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003926_P001 Zm00001e003926 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e008030_P003 Zm00001e008030 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e022061_P001 Zm00001e022061 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004856 xylulokinase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005363 maltose transmembrane transporter activity IEP HCCA
BP GO:0005983 starch catabolic process IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 133 209
IPR004045 Glutathione_S-Trfase_N 254 328
No external refs found!