AT4G06746 (RAP2.9, DEAR5)

Aliases : RAP2.9, DEAR5

Description : related to AP2 9

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G06746

Target	Alias	Description	ECC score	Gene Family Method
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.02	OrthoFinder output from all 47 species
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.02	OrthoFinder output from all 47 species
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g022278	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g07170	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g25693	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g04425	DEAR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g39294	tny	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene03223.t1	DEAR2, Aspi01Gene03223	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene05658.t1	Aspi01Gene05658	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene05659.t1	Aspi01Gene05659	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene11852.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene21082.t1	Aspi01Gene21082	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene21086.t1	Aspi01Gene21086	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene24401.t1	DEAR2, Aspi01Gene24401	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene27034.t1	TINY2, Aspi01Gene27034	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene31384.t1	ERF110, Aspi01Gene31384	subgroup ERF-X transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene34446.t1	Aspi01Gene34446	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene35032.t1	Rap2.6L, Aspi01Gene35032	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene43376.t1	DREB26, Aspi01Gene43376	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene43377.t1	DREB26, Aspi01Gene43377	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene47288.t1	Aspi01Gene47288	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene58616.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene61391.t1	DEAR3, Aspi01Gene61391	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene72130.t1	TINY2, Aspi01Gene72130	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01032983001	Rap2.6L	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
GSVIVT01034563001	ERF110	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
Gb_25978	ABI4, SAN5,...	Ethylene-responsive transcription factor ABI4...	0.01	OrthoFinder output from all 47 species
Gb_34846	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g51670.1	RAP2.4, LOC_Os02g51670	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os07g22730.1	ERF1, ATERF1,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g01080	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g21808	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g22108	No alias	subgroup ERF-I transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Lfl_g23265	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g40614	ERF110	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g05560	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g08521	RAP2.1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g32689	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Solyc03g005520.1.1	ERF1, ATERF1,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc06g063070.3.1	RAP2.12, Solyc06g063070	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Solyc08g078180.1.1	ERF2, ATERF2,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Solyc09g089910.1.1	Solyc09g089910	transcription factor (ERF). transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Solyc09g089930.3.1	ERF1, ATERF1,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Zm00001e007351_P001	ERF-6-6, ERF6,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Zm00001e015869_P001	RAP2.4, Zm00001e015869	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e020274_P001	TMO3, CRF2,...	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Zm00001e023870_P001	RAP2.4, Zm00001e023870	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e036401_P001	DEAR3, Zm00001e036401	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	35	84

External Links

No external refs found!

AT4G06746 (RAP2.9, DEAR5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation