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  5. AT4G05320

AT4G05320 (UBQ10)


Aliases : UBQ10

Description : polyubiquitin 10


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05320

Target Alias Description ECC score Gene Family Method Actions
Ala_g07703 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08097 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08770 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24990 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26761 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26970 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49621 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g49928 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55811 UBQ11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g63264 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18376 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16403.t1 UBQ10, Aspi01Gene16403 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44628.t1 RUB1, ATRUB1,... RUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13975 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15004 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g43648 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77158 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g79076 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G048500.1 UBQ11, Ceric.24G048500 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G039400.1 UBQ3, Ceric.27G039400 UBQ ubiquitin-fold protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G037800.1 UBQ3, Ceric.29G037800 UBQ ubiquitin-fold protein & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.29G037900.1 UBQ3, Ceric.29G037900 UBQ ubiquitin-fold protein & original description:... 0.06 OrthoFinder output from all 47 species
Cre07.g317050 No alias Polyubiquitin (Fragment) OS=Acetabularia peniculus 0.02 OrthoFinder output from all 47 species
Dac_g08622 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37476 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08482 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28640 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41473 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g45828 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023471001 UBQ10 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Len_g06287 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14650 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22941 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23365 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g28234 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
MA_41251g0030 UBQ10 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
Msp_g02683 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38540 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26810 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c13_20060V3.1 Pp3c13_20060 ubiquitin 8 0.02 OrthoFinder output from all 47 species
Sam_g19042 No alias UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36052 No alias UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Smo162003 UBQ14 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g08748 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53872 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007568 aging IEP Interproscan
BP GO:0009751 response to salicylic acid IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
CC GO:0009707 chloroplast outer membrane IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046967 cytosol to endoplasmic reticulum transport IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 231 302
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 155 226
IPR000626 Ubiquitin-like_dom 307 378
No external refs found!