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  5. AT4G05030

AT4G05030


Description : Copper transport protein family


Gene families : OG0007296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G05030
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00147320 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G07600 No alias Heavy metal transport/detoxification superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G48290 No alias Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01003315001 No alias ATP-dependent 6-phosphofructokinase 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01003316001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01014795001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014798001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01026843001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01030135001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os02g37290.1 LOC_Os02g37290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g37300.1 LOC_Os02g37300 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g37320.1 LOC_Os02g37320 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g37330.1 LOC_Os02g37330 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g39010.1 LOC_Os04g39010 no description available(sp|f7j0n2|rga5r_orysj : 88.2) 0.05 OrthoFinder output from all 47 species
LOC_Os04g39360.1 LOC_Os04g39360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g39370.1 LOC_Os04g39370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g09930.1 LOC_Os09g09930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g056180.2.1 Solyc07g056180 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc07g056190.3.1 Solyc07g056190 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc07g056200.3.1 Solyc07g056200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007852_P001 Zm00001e007852 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007853_P002 Zm00001e007853 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007859_P001 Zm00001e007859 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e014956_P001 Zm00001e014956 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e014958_P001 Zm00001e014958 no description available(sp|f2vyu4|pik1_orysj : 91.7) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004551 dinucleotide phosphatase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007584 response to nutrient IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010266 response to vitamin B1 IEP HCCA
MF GO:0010297 heteropolysaccharide binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033273 response to vitamin IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035529 NADH pyrophosphatase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0047631 ADP-ribose diphosphatase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0080151 positive regulation of salicylic acid mediated signaling pathway IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!