AT4G02980 (ABP1, ABP)

Aliases : ABP1, ABP

Description : endoplasmic reticulum auxin binding protein 1

Gene families : OG0005979 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005979_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02980

Target	Alias	Description	ECC score	Gene Family Method	Actions
Als_g06968	ABP1, ABP	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.39G015400.1	ABP1, ABP,...	not classified & original description: pacid=50583084...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008361	regulation of cell size	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	IMP	Interproscan
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010011	auxin binding	IMP	Interproscan
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	None	Extended
BP	GO:0032877	positive regulation of DNA endoreduplication	IMP	Interproscan
BP	GO:0040007	growth	None	Extended
MF	GO:0042562	hormone binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045740	positive regulation of DNA replication	None	Extended
BP	GO:0045787	positive regulation of cell cycle	None	Extended
BP	GO:0045793	positive regulation of cell size	IMP	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051054	positive regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051302	regulation of cell division	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051781	positive regulation of cell division	IMP	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090068	positive regulation of cell cycle process	None	Extended
BP	GO:0090329	regulation of DNA-templated DNA replication	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000105	positive regulation of DNA-templated DNA replication	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008154	actin polymerization or depolymerization	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
CC	GO:0015629	actin cytoskeleton	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0030041	actin filament polymerization	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0090351	seedling development	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000526	Auxin-bd	34	198

External Links

No external refs found!

AT4G02980 (ABP1, ABP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation