AT4G02670 (AtIDD12, IDD12)

Aliases : AtIDD12, IDD12

Description : indeterminate(ID)-domain 12

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02670
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AT3G50700	IDD2, AtIDD2	indeterminate(ID)-domain 2	0.03	OrthoFinder output from all 47 species
Als_g18581	JKD	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21518	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene34058.t1	IDD16, AtIDD16,...	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g03862	IDD16, AtIDD16	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g29791	AtIDD12, IDD12	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01010284001	IDD4, AtIDD4	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
Gb_21530	IDD2, AtIDD2	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os01g39110.1	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
LOC_Os08g36390.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc03g098070.3.1	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc04g008500.4.1	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc09g007550.3.1	JKD, Solyc09g007550	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Spa_g18118	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g38393	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g50327	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e004751_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species
Zm00001e026143_P001	MGP, Zm00001e026143	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
BP	GO:0008360	regulation of cell shape	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0060688	regulation of morphogenesis of a branching structure	IEP	HCCA
BP	GO:0080154	regulation of fertilization	IEP	HCCA
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:1905428	regulation of plant organ formation	IEP	HCCA
BP	GO:2000029	regulation of proanthocyanidin biosynthetic process	IEP	HCCA
BP	GO:2000032	regulation of secondary shoot formation	IEP	HCCA
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT4G02670 (AtIDD12, IDD12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation