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AT4G02540


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0007015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007015_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G02540

Target Alias Description ECC score Gene Family Method Actions
AT1G29179 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
AT1G53340 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT1G66440 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G02620 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G02680 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT2G02690 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT3G50010 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT4G13130 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0080127 fruit septum development IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:1905328 plant septum development IEP HCCA
BP GO:2001289 lipid X metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 708 758
IPR004146 DC1 386 436
IPR004146 DC1 592 642
IPR004146 DC1 327 374
IPR004146 DC1 533 583
IPR004146 DC1 447 496
IPR004146 DC1 652 699
No external refs found!