AT4G02330 (ATPMEPCRB)

Aliases : ATPMEPCRB

Description : Plant invertase/pectin methylesterase inhibitor superfamily

Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02330
Cluster	HCCA: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00109420	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.05	OrthoFinder output from all 47 species
AT2G26450	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
AT3G05610	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
AT4G33230	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
Aev_g09825	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aev_g12203	PME1, ATPME1	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Aob_g23889	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aop_g11322	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene10964.t1	Aspi01Gene10964	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Azfi_s3257.g115118	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species
Cba_g01077	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ceric.01G014700.1	Ceric.01G014700	EC_3.1 hydrolase acting on ester bond & original...	0.04	OrthoFinder output from all 47 species
Ceric.1Z117500.1	ATPME2, PME2,...	EC_3.1 hydrolase acting on ester bond & original...	0.05	OrthoFinder output from all 47 species
Dac_g13438	ATPME2, PME2	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Ehy_g01475	ATPMEPCRF, PMEPCRF	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01028041001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
Gb_06356	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Gb_36005	No alias	pectin methylesterase	0.05	OrthoFinder output from all 47 species
Gb_38211	ATPMEPCRA, PMEPCRA	pectin methylesterase	0.06	OrthoFinder output from all 47 species
LOC_Os01g21034.1	ATPME3, PME3,...	pectin methylesterase	0.02	OrthoFinder output from all 47 species
LOC_Os06g09340.1	LOC_Os06g09340	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp6g15150.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp8g00060.1	ATPME2, PME2	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp8g09330.1	RHS12	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Ore_g18095	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ore_g22612	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Pir_g07009	ATPME2, PME2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Pir_g18600	ATPME2, PME2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000947	No alias	not classified & original description: CDS=1-831	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013432	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018433	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0255.g026821	No alias	not classified & original description: CDS=300-1226	0.04	OrthoFinder output from all 47 species
Solyc01g057220.3.1	Solyc01g057220	pectin methylesterase	0.05	OrthoFinder output from all 47 species
Solyc03g123620.4.1	PME1, ATPME1,...	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Spa_g01966	ATPME2, PME2	EC_3.1 hydrolase acting on ester bond & original...	0.06	OrthoFinder output from all 47 species
Tin_g15341	ATPME2, PME2	EC_3.1 hydrolase acTing on ester bond & original...	0.04	OrthoFinder output from all 47 species
Zm00001e035838_P001	Zm00001e035838	pectin methylesterase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015804	neutral amino acid transport	None	Extended
BP	GO:0015824	proline transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IMP	Interproscan
MF	GO:0030599	pectinesterase activity	ISS	Interproscan
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0009753	response to jasmonic acid	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0070542	response to fatty acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006501	Pectinesterase_inhib_dom	32	184
IPR000070	Pectinesterase_cat	259	557

External Links

No external refs found!

AT4G02330 (ATPMEPCRB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation