AT4G02180

Description : DC1 domain-containing protein

Gene families : OG0004669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004669_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G02180
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AT1G58037	No alias	Cysteine/Histidine-rich C1 domain family protein	0.1	OrthoFinder output from all 47 species
AT3G07000	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
AT3G27480	No alias	Cysteine/Histidine-rich C1 domain family protein	0.06	OrthoFinder output from all 47 species
AT3G45530	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
AT4G01910	No alias	Cysteine/Histidine-rich C1 domain family protein	0.06	OrthoFinder output from all 47 species
AT4G01920	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT4G01925	No alias	Cysteine/Histidine-rich C1 domain family protein	0.09	OrthoFinder output from all 47 species
AT4G13992	No alias	Cysteine/Histidine-rich C1 domain family protein	0.06	OrthoFinder output from all 47 species
AT4G16015	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT5G16430	No alias	Cysteine/Histidine-rich C1 domain family protein	0.05	OrthoFinder output from all 47 species
AT5G22355	No alias	Cysteine/Histidine-rich C1 domain family protein	0.07	OrthoFinder output from all 47 species
AT5G26190	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT5G29624	No alias	Cysteine/Histidine-rich C1 domain family protein	0.01	OrthoFinder output from all 47 species
AT5G37620	No alias	Cysteine/Histidine-rich C1 domain family protein	0.05	OrthoFinder output from all 47 species
AT5G39471	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT5G43040	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
AT5G44770	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
AT5G54030	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT5G59930	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010093	specification of floral organ identity	RCA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048440	carpel development	RCA	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0090701	specification of plant organ identity	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006824	cobalt ion transport	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
MF	GO:0015087	cobalt ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015099	nickel cation transmembrane transporter activity	IEP	HCCA
BP	GO:0015675	nickel cation transport	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0055068	cobalt ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004146	DC1	152	196
IPR004146	DC1	516	564
IPR004146	DC1	95	139
IPR004146	DC1	401	444
IPR004146	DC1	711	760
IPR004146	DC1	273	314
IPR004146	DC1	577	618
IPR004146	DC1	457	500
IPR004146	DC1	212	260

External Links

No external refs found!

AT4G02180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation