Pnu_g30607 (CRR2)


Aliases : CRR2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30607

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00072730 MEF21,... Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Adi_g004440 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100866 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110647 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36514 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08105 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11529 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36877 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28421 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046573 No alias not classified & original description: CDS=1-1419 0.02 OrthoFinder output from all 47 species
Azfi_s0474.g072983 No alias not classified & original description: CDS=1-2562 0.03 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.03 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04726 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19300 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20779 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g42618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.03 OrthoFinder output from all 47 species
Ceric.14G093100.1 EMB2758, Ceric.14G093100 not classified & original description: pacid=50634261... 0.03 OrthoFinder output from all 47 species
Ceric.22G068500.1 Ceric.22G068500 not classified & original description: pacid=50614116... 0.03 OrthoFinder output from all 47 species
Ceric.28G056200.1 Ceric.28G056200 not classified & original description: pacid=50570685... 0.03 OrthoFinder output from all 47 species
Ceric.28G069900.1 Ceric.28G069900 not classified & original description: pacid=50570610... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.02 OrthoFinder output from all 47 species
Dac_g05541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12748 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g25885 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27114 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17941 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28398 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01037258001 No alias Pentatricopeptide repeat-containing protein At5g27110... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g14450.1 LOC_Os04g14450 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Len_g04809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17565 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11093 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Msp_g06422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23174 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26145 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48107 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47021 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04648 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06858 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06906 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35988 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53548 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53964 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002236 No alias not classified & original description: CDS=1-2649 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008413 No alias not classified & original description: CDS=1-1578 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019284 No alias not classified & original description: CDS=34-390 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021689 No alias S-adenosyl methionine transporter *(GOSAMT) & original... 0.02 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Smo99756 No alias Pentatricopeptide repeat-containing protein At2g39620... 0.05 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.03 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.02 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g04485 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06116 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20297 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23977 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26827 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g42246 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55598 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17314 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27970 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.05 OrthoFinder output from all 47 species
Zm00001e034903_P001 SLO1, Zm00001e034903 Pentatricopeptide repeat-containing protein At2g22410,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004061 arylformamidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019441 tryptophan catabolic process to kynurenine IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0070189 kynurenine metabolic process IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 311 373
IPR002885 Pentatricopeptide_repeat 2 41
IPR002885 Pentatricopeptide_repeat 95 142
IPR002885 Pentatricopeptide_repeat 270 291
IPR002885 Pentatricopeptide_repeat 69 94
IPR002885 Pentatricopeptide_repeat 170 192
IPR002885 Pentatricopeptide_repeat 233 261
IPR002885 Pentatricopeptide_repeat 195 230
No external refs found!