AT4G01640

Description : F-box associated ubiquitination effector family protein

Gene families : OG0011367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011367_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G01640
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G05600	No alias	F-box associated ubiquitination effector family protein	0.01	OrthoFinder output from all 47 species
AT3G25550	No alias	F-box family protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006527	F-box-assoc_dom_typ1	148	244

External Links

No external refs found!