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AT4G00480 (myc1, ATMYC1)


Aliases : myc1, ATMYC1

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00480

Target Alias Description ECC score Gene Family Method Actions
Adi_g034410 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31846 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22673 ATMYC2, MYC2,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc08g081140.4.1 MYC6.2, GL3,... transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Tin_g26364 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009913 epidermal cell differentiation RCA Interproscan
BP GO:0009957 epidermal cell fate specification RCA Interproscan
BP GO:0048629 trichome patterning IMP Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 23 216
No external refs found!