AT3G62040

Description : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Gene families : OG0001883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001883_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G62040

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00040030	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT2G32150	No alias	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G59490	No alias	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	0.04	OrthoFinder output from all 47 species
Aev_g13135	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G039300.1	Ceric.20G039300	not classified & original description: pacid=50566645...	0.03	OrthoFinder output from all 47 species
Dcu_g36140	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017946001	No alias	No description available	0.05	OrthoFinder output from all 47 species
LOC_Os03g49440.1	LOC_Os03g49440	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os03g61829.1	LOC_Os03g61829	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os07g44060.1	LOC_Os07g44060	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g13591	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g39315	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_44944g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_538167g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_865197g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Ore_g11345	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33605	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43069	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g43071	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63716	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc01g068630.3.1	Solyc01g068630	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e001210_P001	Zm00001e001210	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
MF	GO:0016787	hydrolase activity	ISS	Interproscan
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004064	arylesterase activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0009691	cytokinin biosynthetic process	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0015695	organic cation transport	IEP	HCCA
MF	GO:0016289	CoA hydrolase activity	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0047617	acyl-CoA hydrolase activity	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0080022	primary root development	IEP	HCCA
BP	GO:0080181	lateral root branching	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G62040

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation