AT3G61740 (ATX3, SDG14)

Aliases : ATX3, SDG14

Description : SET domain protein 14

Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G61740

Target	Alias	Description	ECC score	Gene Family Method
Ala_g07772	SDG25, ATXR7	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ala_g39316	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.02	OrthoFinder output from all 47 species
Aob_g04447	ATX4, SDG16	class-III histone methyltransferase *(Trx) & original...	0.04	OrthoFinder output from all 47 species
Aob_g29752	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.04	OrthoFinder output from all 47 species
Aop_g13681	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene52716.t1	SDG25, ATXR7,...	class-III histone methyltransferase *(Trx) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene66938.t1	ATX4, SDG16,...	class-III histone methyltransferase *(Trx) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0020.g015423	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.04	OrthoFinder output from all 47 species
Cba_g20256	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.05	OrthoFinder output from all 47 species
Ceric.32G012900.1	SDG25, ATXR7,...	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020553.148	No alias	Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Dac_g22715	ATX3, SDG14	class-III histone methyltransferase *(Trx) & original...	0.05	OrthoFinder output from all 47 species
Dcu_g08323	SET29, SDG29, ATX5	class-III histone methyltransferase *(Trx) & original...	0.05	OrthoFinder output from all 47 species
Dcu_g24243	ATX4, SDG16	class-III histone methyltransferase *(Trx) & original...	0.03	OrthoFinder output from all 47 species
Gb_04139	SDG25, ATXR7	class III/Trithorax histone methyltransferase component...	0.04	OrthoFinder output from all 47 species
Len_g12097	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.03	OrthoFinder output from all 47 species
Len_g14720	ATX4, SDG16	class-III histone methyltransferase *(Trx) & original...	0.02	OrthoFinder output from all 47 species
Len_g23260	SET29, SDG29, ATX5	class-III histone methyltransferase *(Trx) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g09511	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.03	OrthoFinder output from all 47 species
MA_14080g0020	ATX3, SDG14	Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Mp4g21720.1	ATX4, SDG16	class III/Trithorax histone methyltransferase component...	0.02	OrthoFinder output from all 47 species
Ore_g34239	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47178	SDG25, ATXR7	class-III histone methyltransferase *(Trx) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e039307_P005	SDG25, ATXR7,...	class III/Trithorax histone methyltransferase component...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005635	nuclear envelope	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030121	AP-1 adaptor complex	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
MF	GO:0030276	clathrin binding	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001214	SET_dom	886	992
IPR000313	PWWP_dom	187	284
IPR000770	SAND_dom	447	505
IPR019787	Znf_PHD-finger	364	417

External Links

No external refs found!

AT3G61740 (ATX3, SDG14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation