AT3G61490

Description : Pectin lyase-like superfamily protein

Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G61490

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00141260	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	OrthoFinder output from all 47 species
AMTR_s00107p00122980	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.03	OrthoFinder output from all 47 species
Aop_g05572	No alias	EC_3.2 glycosylase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0293.g063444	No alias	EC_3.2 glycosylase & original description: CDS=788-2134	0.06	OrthoFinder output from all 47 species
Ehy_g07611	No alias	EC_3.2 glycosylase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09827	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13296	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g17286	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26793	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19426	No alias	EC_3.2 glycosylase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e029809_P002	Zm00001e029809	Probable polygalacturonase OS=Vitis vinifera...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	ISS	Interproscan
BP	GO:0005975	carbohydrate metabolic process	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	141	423
IPR024535	Pectate_lyase_SF_prot	46	130

External Links

No external refs found!