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  5. AT3G59180

AT3G59180


Description : Protein with RNI-like/FBD-like domains


Gene families : OG0003469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G59180
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G19070 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT1G47920 No alias RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G48400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from all 47 species
AT2G29910 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G29930 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G42770 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G54160 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G58860 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G58920 No alias F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G59230 No alias RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G59240 No alias RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G62440 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G15620 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G25860 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G35926 No alias Protein with RNI-like/FBD-like domains 0.06 OrthoFinder output from all 47 species
AT5G38396 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004407 histone deacetylase activity IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019213 deacetylase activity IEP HCCA
MF GO:0033558 protein lysine deacetylase activity IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 129 156
No external refs found!