AT3G57520 (SIP2, AtSIP2)

Aliases : SIP2, AtSIP2

Description : seed imbibition 2

Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G57520

Target	Alias	Description	ECC score	Gene Family Method
Lfl_g13949	SIP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Mp3g19770.1	SIP2, AtSIP2	Probable galactinol--sucrose galactosyltransferase 2...	0.03	OrthoFinder output from all 47 species
Solyc07g065980.3.1	AtSIP1, SIP1,...	galactinol-sucrose galactosyltransferase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISS	Interproscan
MF	GO:0004557	alpha-galactosidase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009313	oligosaccharide catabolic process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
MF	GO:0015925	galactosidase activity	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0033530	raffinose metabolic process	None	Extended
BP	GO:0034484	raffinose catabolic process	IDA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0052692	raffinose alpha-galactosidase activity	IDA	Interproscan
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008811	Glycosyl_hydrolases_36	7	756

External Links

No external refs found!

AT3G57520 (SIP2, AtSIP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation