1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G57420

AT3G57420


Description : Protein of unknown function (DUF288)


Gene families : OG0002094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002094_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57420
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00241980 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Adi_g017471 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Adi_g059366 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Adi_g088078 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Aev_g38947 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Ala_g02495 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Ala_g04970 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Als_g23886 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Als_g39946 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.02 OrthoFinder output from all 47 species
Aob_g02245 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Aob_g06721 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Aop_g08920 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Aop_g21814 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene68802.t1 Aspi01Gene68802 cellulose synthase CSC-interactive protein *(STELLO) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012156 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Ceric.08G007900.1 Ceric.08G007900 cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Ceric.17G054300.1 Ceric.17G054300 cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Ceric.34G063900.1 Ceric.34G063900 cellulose synthase CSC-interactive protein *(STELLO) &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000402.44 No alias Probable glycosyltransferase STELLO2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g13671 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Dac_g28417 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Dcu_g05711 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Dcu_g08922 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Dde_g05921 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Dde_g09107 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04051 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Ehy_g06155 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033278001 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.06 OrthoFinder output from all 47 species
Gb_12974 No alias STELLO-type cellulose synthase CSC-interactive protein 0.07 OrthoFinder output from all 47 species
LOC_Os05g32500.1 LOC_Os05g32500 STELLO-type cellulose synthase CSC-interactive protein 0.11 OrthoFinder output from all 47 species
Len_g01883 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Len_g39327 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Lfl_g06646 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Msp_g07867 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Msp_g09390 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Msp_g18546 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.04 OrthoFinder output from all 47 species
Nbi_g04935 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Nbi_g13995 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Ore_g20939 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Pir_g10905 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Pir_g14788 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Pnu_g12980 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Ppi_g32362 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017219 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Sam_g11212 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Sam_g14242 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.07 OrthoFinder output from all 47 species
Smo127776 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.05 OrthoFinder output from all 47 species
Smo152766 No alias Cell wall.cellulose.synthesis.cellulose synthase complex... 0.05 OrthoFinder output from all 47 species
Solyc01g087600.3.1 Solyc01g087600 STELLO-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Solyc04g015740.3.1 Solyc04g015740 STELLO-type cellulose synthase CSC-interactive protein 0.09 OrthoFinder output from all 47 species
Spa_g05371 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.07 OrthoFinder output from all 47 species
Spa_g21336 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.03 OrthoFinder output from all 47 species
Tin_g05198 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.05 OrthoFinder output from all 47 species
Tin_g28417 No alias cellulose synthase CSC-interactive protein *(STELLO) &... 0.06 OrthoFinder output from all 47 species
Zm00001e031589_P002 Zm00001e031589 STELLO-type cellulose synthase CSC-interactive protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0016757 glycosyltransferase activity ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006109 regulation of carbohydrate metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008810 cellulase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009833 plant-type primary cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010154 fruit development IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR005049 STL-like 352 466
No external refs found!