1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G57200

AT3G57200


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41451.1); Has 94 Blast hits to 94 proteins in 31 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).


Gene families : OG0003231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003231_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57200
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Nbi_g03035 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ppi_g13510 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Tin_g14763 ABI8, ELD1, KOB1 regulatory protein *(KOBITO) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0016757 glycosyltransferase activity ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007163 establishment or maintenance of cell polarity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0030010 establishment of cell polarity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090451 cotyledon boundary formation IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!