AT3G55570


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55570
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT5G41761 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
Ceric.38G022700.1 Ceric.38G022700 not classified & original description: pacid=50580252... 0.03 OrthoFinder output from all 47 species
Dcu_g06700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39892 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016477001 No alias No description available 0.08 OrthoFinder output from all 47 species
Len_g06689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009024 No alias not classified & original description: CDS=1-315 0.04 OrthoFinder output from all 47 species
Spa_g20954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44398 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019499 cyanide metabolic process IEP HCCA
BP GO:0046202 cyanide biosynthetic process IEP HCCA
BP GO:0048654 anther morphogenesis IEP HCCA
BP GO:0048658 anther wall tapetum development IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!