Heatmap: Cluster_92 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
- -1.35 -0.25 -1.65 -0.59 - -0.78 -4.22 - -6.56 - -5.4 -1.92 -1.84 -1.09 -1.45 -1.79 -2.2 4.83 -1.44 - -0.06 1.37 -0.94 -4.38 -1.04 - -1.16 1.75 -5.17 -2.66 -2.58 -1.55 -2.84 -0.44 0.58 -1.78 -1.09 -3.91 -0.21 - -0.27 -3.89 - -1.3 - - -5.98
-1.99 -0.71 -0.82 3.01 0.2 - 0.7 - - - - -0.38 -1.19 -0.52 - 1.45 - - 0.37 -0.75 - - - -0.6 -0.6 - -0.47 -0.22 -1.8 - -1.95 3.15 0.42 -1.32 3.01 - - 0.22 1.94 - - - - 0.33 -0.25 - - -
AT1G13290 (WIP6)
-0.5 2.63 - - - -0.97 - - - - - - - - 1.95 -2.55 0.11 1.92 3.67 3.04 - - -1.02 - - -4.73 - - - - - - -3.99 - 2.75 - - 1.61 -5.98 - - -1.59 - - - - - -
- -6.87 - - -3.68 -3.87 -3.55 - - -3.7 - -1.01 - - -2.52 -2.58 - - 3.5 1.61 -3.95 1.56 -2.52 1.17 0.28 1.44 -1.59 0.11 3.25 -1.29 -4.42 -0.78 - - -4.14 - 0.81 -0.63 -4.18 1.63 - - -2.5 - 0.31 - 2.06 -
-10.29 -2.69 -4.12 -4.29 -4.88 -5.15 -5.06 -8.74 -5.23 -4.54 -4.91 -8.18 -4.23 -2.77 -1.92 -3.35 -3.73 -3.8 5.46 -2.19 -4.49 -3.25 -3.54 -4.08 -3.89 -4.45 -2.8 -4.76 -1.73 -5.17 -5.35 -4.61 -4.09 -3.55 -5.51 -3.87 -2.72 -3.37 -2.36 - -1.25 -2.29 -3.08 -5.2 -3.15 - - -4.86
- - 2.11 1.18 1.82 - 2.21 - - -1.19 - 0.8 4.82 - - - - - 0.87 -3.47 - - - -7.35 - - - - -0.6 - -2.68 - - - - - - -6.35 - - - - - - - - - -
- 1.6 - -4.76 - - - - - - - -6.79 - -2.35 3.02 0.64 0.29 0.63 -1.2 1.59 -4.88 3.87 2.42 -0.27 -4.09 0.56 0.37 -1.46 -6.13 - -1.34 -3.69 0.26 -2.83 -0.16 -1.75 - 0.69 -3.63 - - - - - - - -6.55 -5.85
AT1G69440 (ZIP)
-0.33 1.84 -2.78 -4.95 -3.76 -3.88 -5.32 - - - - - -9.24 1.13 0.97 0.76 -2.05 -0.13 -2.33 1.96 1.18 0.77 -0.22 -0.03 -4.05 0.2 -3.31 2.25 -1.28 -4.21 0.17 0.57 -0.25 0.1 1.68 1.0 2.02 0.76 -0.82 -3.14 - -1.07 -3.51 -0.47 -0.53 - 0.43 -1.36
2.89 -0.69 2.28 1.62 0.79 -1.85 2.05 -0.53 -0.93 -2.01 -5.21 -3.02 -1.74 -4.39 -4.05 -3.5 - - 2.29 -0.86 -3.47 -2.52 -5.05 -0.86 -5.52 -1.77 -4.99 0.93 2.94 -5.89 -5.27 -0.17 -4.37 -4.41 -4.21 -1.31 -1.19 -2.9 -3.78 2.4 - - - -3.44 -5.03 - - -6.25
-2.82 1.77 2.01 1.25 1.07 -1.32 0.36 - - -7.37 -5.88 - -1.9 0.2 0.2 0.61 -0.73 -1.12 -1.05 1.51 0.02 0.09 0.58 -0.39 -1.3 -0.03 -0.58 2.14 0.66 -0.15 -0.81 -1.14 0.33 -0.32 0.28 0.08 0.53 0.12 -0.93 1.48 -3.85 -2.78 -3.12 -2.11 -4.11 -0.77 - -4.3
AT1G75790 (sks18)
-7.41 -2.61 -0.64 -2.0 -1.45 -3.82 -2.45 - - -6.36 -5.06 -5.43 -3.13 - -0.95 -3.99 - - 5.47 -2.22 - -3.13 - -3.56 -2.79 -5.54 -4.89 - -2.51 -4.02 - -3.54 - - -7.24 - -4.91 -3.84 - - - - - - -3.93 - - -
AT1G77860 (KOM)
-8.35 0.32 1.1 2.61 1.5 0.66 2.92 -2.63 - -2.24 -4.99 0.62 -5.65 -1.19 -1.88 -1.59 -2.8 -1.16 0.72 0.87 0.88 0.38 0.4 -0.8 -3.21 -1.3 -0.99 -0.37 1.88 -6.75 0.19 -0.82 -1.23 0.14 0.41 0.34 -2.14 0.33 -2.44 -4.76 - -1.95 -2.87 -0.82 -1.4 - - -3.18
- 1.19 - 3.21 2.22 - 3.96 - - - - - - - - - - - - - - - - - - - - - 1.36 - - - -0.7 - - - - -1.6 - - - - - 2.82 2.23 - - 0.01
5.5 1.41 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.35 2.31 -4.8 -2.75 -1.67 -3.11 -1.33 - -5.08 -7.09 -3.85 -3.87 -6.45 -1.22 0.64 -2.2 -5.95 -1.22 2.09 4.19 3.29 -3.05 -0.75 -4.46 - -5.25 -4.88 - -3.68 - 1.75 -5.14 - -2.95 -0.29 - - -3.21 - - - -2.75 - - -5.65 - - -6.84
AT2G27035 (ENODL20)
2.34 -0.41 - -3.44 -4.47 -5.39 -4.37 -2.69 - -2.27 -5.58 - - -0.02 -2.94 0.61 0.79 0.61 -0.56 -1.78 -4.13 0.25 -0.59 -0.13 - -0.35 - -4.89 1.15 - 0.05 0.06 0.44 1.13 -0.08 3.39 -0.71 0.61 -2.35 - - 2.35 -1.92 -3.33 2.0 - - -
-0.99 -0.12 0.64 2.1 2.39 1.21 1.94 0.9 - - - - - -1.43 2.86 -1.73 - - - -0.9 - -0.15 - -6.23 - - 1.29 0.99 0.69 -2.51 -0.7 -1.38 -0.57 - - - 0.11 -1.84 -2.49 - - 0.28 -0.65 - - 2.71 - -1.72
-1.1 0.84 0.22 -0.01 -0.57 -6.12 -0.82 - -4.09 - - - - -1.29 -0.03 -3.25 - -0.61 4.2 0.76 -4.28 -4.11 -2.26 -1.32 -3.3 -3.18 - 2.12 -1.84 -2.38 0.18 -0.07 -2.62 -3.14 3.03 -3.74 - -1.86 -5.28 - - 1.09 -1.85 -1.07 -1.57 - - -2.15
3.68 -0.14 - - 3.48 - - - - - - 2.49 - 0.32 - - - - - 1.1 - - - 0.2 - 1.07 - - 2.07 - - - - - - - 1.4 -1.82 -2.32 1.61 - - - - - - -0.83 -
- -3.22 2.62 3.06 3.46 2.22 2.26 1.82 -1.65 0.23 -0.1 -2.76 -3.17 -1.79 - - -2.4 - 0.97 -1.89 - - -1.29 -2.1 - -3.39 0.31 - -0.75 - -1.97 - -4.38 - -2.59 - -0.71 -2.62 -4.86 - - - - - - - - -2.42
0.11 0.21 - 1.98 -0.55 - - 0.37 - - - - - - - - - - 4.62 1.97 - -0.52 - -0.76 -0.35 -2.12 - - 0.15 -0.87 -2.54 -1.09 -1.92 -0.74 -1.95 - - 0.14 - - - - - 0.59 1.59 - - -
3.94 -0.24 - -4.01 -1.74 -3.38 -2.89 - -5.35 -5.66 -5.03 3.84 1.25 -3.77 -3.91 - -2.32 -3.03 -1.11 2.57 - -3.65 -4.91 -4.55 -4.32 -6.98 -1.77 - -2.8 -2.77 -2.21 -3.38 -4.95 -1.94 1.4 -4.97 -1.65 0.42 -6.07 -3.2 -4.8 -1.98 -0.74 - -0.31 - - -3.74
0.68 0.91 1.68 1.53 1.4 0.9 - -1.56 - -2.39 - - - 0.16 - -0.44 - - 2.66 1.37 - 1.11 -0.02 -4.97 0.13 -2.04 0.5 2.24 -1.45 - -1.44 -0.85 -3.1 -1.51 -1.95 -0.03 -0.07 -0.93 -2.65 -0.01 - - 0.03 1.63 0.05 - - 0.22
2.89 0.99 0.86 1.72 2.31 2.05 2.58 -3.14 0.82 -2.45 -0.43 -0.37 -1.13 -1.75 - - - - -2.35 -0.29 - - -4.31 -2.06 - -3.48 -4.26 2.91 1.01 -2.47 0.31 -2.84 -5.11 - -1.78 - -4.56 -2.43 -8.17 - - -3.39 -4.3 -1.13 -2.72 - - -2.12
AT3G28470 (TDF1)
-2.16 -0.32 -0.28 1.79 0.54 - 0.24 -3.02 -1.55 -4.5 -1.87 - -2.47 -2.91 -0.7 - - - 2.24 -0.61 - -2.2 -2.7 -2.51 -3.18 -4.84 -1.9 -1.07 2.98 -2.25 -1.64 -2.61 -2.85 -2.72 -0.49 -2.76 -0.44 -0.11 -0.77 -0.41 - 0.23 -0.68 -2.1 -0.68 4.01 - -
-4.94 -1.96 0.07 -1.34 -0.97 -2.11 -0.97 -2.91 - -1.14 -3.43 - -3.24 -3.07 -1.31 -2.78 - - 4.97 0.05 -2.51 -0.44 -1.05 -2.23 -2.21 -2.47 -3.26 -1.27 0.35 -1.59 -3.5 -2.02 -1.29 -2.76 -5.36 -3.39 -1.41 -0.68 -4.1 1.77 -0.96 - - - -1.3 -0.96 -2.68 -4.52
-2.6 1.17 -1.07 -1.04 -1.47 -2.92 -0.86 - - - -5.99 - - 0.71 1.85 0.84 -4.92 -5.29 1.75 3.3 0.1 -1.6 -1.84 0.08 -4.29 -0.07 -1.38 2.86 -1.59 -5.31 -0.55 -3.77 -0.95 -2.69 1.31 -3.14 2.24 -0.11 0.78 -3.11 - - -7.47 -6.86 -6.44 - - -5.63
- - - - - - - - 2.39 1.3 - - - - - - - - 1.4 0.52 - 2.59 - 0.7 - 1.63 - - - -0.04 0.34 -0.24 - - -1.55 - 2.87 -1.57 - - - - - - 3.85 - - -
-2.47 -0.35 2.76 2.21 1.62 -3.7 2.32 -4.47 - -2.39 - -4.83 -2.92 -1.65 - -3.34 - -1.87 2.44 -0.7 - -3.39 -1.19 -3.61 - -4.32 - 0.49 -1.98 - -3.36 -2.85 -3.46 -3.23 3.03 -0.75 -3.39 0.8 -5.46 -1.22 - - -4.13 - -4.12 2.67 - -3.64
AT4G08840 (PUM11)
- 1.33 0.26 3.14 -0.07 - -0.5 - -0.91 - - - - - 2.12 - 3.78 1.14 0.87 3.13 - - - -2.68 - - - - -0.3 -1.32 - - - - -0.71 - - -1.17 - - - - - - - - - -
-2.45 -1.54 1.8 1.9 1.8 0.46 1.35 0.77 -1.65 -1.35 -4.02 1.93 2.31 -2.84 - -3.94 - -2.4 2.56 -2.56 -4.1 -2.93 -2.95 -2.25 - -3.71 -3.1 -3.86 -0.12 - -1.73 -2.61 -4.92 -2.79 -1.73 - - -1.84 -4.73 - - - -3.91 -1.72 -2.31 3.52 - -2.76
-4.61 -3.41 -4.18 -4.45 -2.62 -2.2 -3.68 - -6.97 -8.3 - -2.49 -4.95 -5.1 -1.85 2.87 -3.84 -4.25 2.75 -2.19 -4.6 -3.38 -5.28 -4.59 -5.42 -5.4 -4.65 -3.18 -0.92 -3.89 -4.53 -2.4 -3.36 -2.13 -2.86 -7.62 -4.17 -3.66 -2.76 -2.2 -4.03 1.05 4.54 -2.19 -0.1 - - 1.88
- 1.05 -1.72 - -2.7 2.08 -4.34 3.32 2.46 0.25 1.43 -1.97 -0.81 -0.8 2.09 -1.18 0.48 -4.7 0.87 1.47 - -2.67 -3.35 -1.66 -4.64 -3.66 - 2.54 -1.8 -5.16 -3.52 -5.91 -6.21 -5.52 -0.28 - - 0.85 -3.33 - - - - - - - - -
-1.61 3.23 - - - - 0.92 - - - - - - -1.87 - - - - -1.74 4.11 - - - -4.63 - - - -1.06 -1.46 - 2.24 -1.76 -0.45 - 2.28 - -0.29 2.64 - - - - - - - - - -
AT4G21330 (DYT1)
- - - 1.66 2.92 - 3.32 -1.08 -1.88 -1.18 0.02 - 4.29 - - - - - -1.17 -4.52 - - - -3.66 - -3.59 - - -1.91 - -3.96 - - -3.6 -4.53 - - -3.86 -4.16 - - 0.45 - - 1.54 - - -
AT4G27330 (SPL)
-1.74 1.62 - - -1.4 -3.77 -0.86 - - - - - - -5.24 1.39 -4.51 - - 5.09 2.2 - - - -2.65 - -4.56 - - -1.1 - -4.36 - - - -1.54 - - 0.1 - - - - - - -3.4 - - -
- -4.71 -3.44 -0.18 - - 0.08 - - - - -5.33 - - - - - - 4.56 -0.73 - -1.54 - -3.82 -1.27 -5.37 - -3.13 0.25 -5.02 -4.66 -3.43 -4.65 - -5.52 -3.25 -1.55 -2.53 -6.94 -0.59 - - -3.16 - -2.16 4.14 - -4.34
-1.49 -0.59 2.25 2.73 1.92 -0.5 3.02 -4.06 -1.51 -2.4 -2.45 -3.58 0.48 -2.52 -1.87 -3.1 -4.61 -4.92 2.56 -0.83 - -1.9 -1.7 -0.49 -4.3 -1.36 -4.41 0.59 2.13 -5.8 -1.14 -1.91 -1.74 -0.81 -0.82 -2.72 -3.48 -0.96 -2.41 -4.49 - -2.95 -0.94 -0.54 -1.12 - - -0.01
- - 2.82 - - - - - - - 4.45 2.93 - - - - 2.95 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.89
AT5G06650 (GIS2)
- 3.1 - - - - - - - - -1.44 - - - 2.73 0.3 - - -2.95 2.55 - 2.35 2.39 - - - -1.46 - - - - 0.24 -0.1 -2.49 2.63 -1.33 - -0.33 -3.64 - - 2.25 - - - - - -
- 2.58 -0.48 0.46 1.38 0.88 0.65 - -2.72 - - - - -4.43 -0.32 -1.82 - - 1.09 4.46 -2.75 -1.83 -1.41 -3.7 - -2.89 - 0.53 0.04 -2.19 -2.84 - -4.45 -3.54 0.65 - - -1.2 -2.72 - - -1.39 -0.74 -0.72 -0.72 - - -2.49
AT5G14010 (KNU)
- -0.1 -0.12 1.35 - - - - - - - -0.39 - - - - - - - 1.58 - 1.51 2.97 0.56 - -0.17 - 3.28 3.04 - - - - -0.22 1.27 - - 2.15 - - - - - - - - - 0.26
- -0.39 4.58 1.56 2.26 - 1.44 - - 0.13 - 1.13 - - - 0.57 - - 2.07 -3.0 - - - -1.7 - - - 0.7 - -1.19 - - -1.25 -1.41 - - - -1.97 -1.5 - - - - - - - - -
- -1.52 - - - - - - - - - - - 3.12 -0.85 -0.94 - - 0.25 0.61 - 1.7 - 0.66 -0.29 0.69 -0.92 - 1.25 -1.71 -2.02 2.2 -1.77 0.64 -1.88 - -0.31 0.31 -3.39 - - 3.08 0.97 - 2.34 - - -2.93
- 2.81 0.6 0.78 1.43 -1.28 1.0 - -1.13 - - - - - - - - - 0.21 4.45 - - - - -2.21 -2.89 - -0.1 -3.14 - -2.58 -2.64 -1.77 - 1.61 -1.8 -0.69 -1.88 -3.65 - - - -0.71 -1.13 0.88 - - -
-0.34 -1.86 -2.05 -1.88 - - 0.05 -3.36 - - - -0.59 -2.55 0.64 -0.78 -2.82 -1.38 - 5.14 -0.96 - - -1.82 -1.75 - -1.6 - 1.07 - - -3.32 -5.04 -3.71 -2.39 -5.1 -0.26 - -1.75 -2.31 - - -1.85 -0.45 - - - - -2.9
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.14 2.11 -0.12 0.31 0.29 -1.26 0.73 -5.74 -6.7 -7.71 - -4.94 - - -1.98 -4.55 -4.94 -5.19 -1.54 4.04 -4.5 -3.51 -3.04 -2.8 -4.17 -4.29 -4.36 -0.0 - -5.36 0.39 -3.63 -2.11 -3.44 3.03 -5.36 - 1.6 -7.42 -6.17 - -3.78 -1.3 1.84 -2.96 - - 0.5
- -4.94 - - -0.44 - - - - - - - - -1.91 - - - - 4.56 2.79 - 1.13 -0.91 0.1 -1.38 0.38 - - 2.22 -1.8 -0.41 0.15 - - -2.82 - 0.0 1.36 - - - - - - -0.88 - - -
AT5G53190 (SWEET3)
- 3.17 -5.21 - - -4.77 -4.94 - - -3.95 - -4.67 - -2.83 2.17 - - -6.33 3.74 1.09 -0.04 -5.18 - -3.81 -5.42 -4.76 -5.14 - -4.97 -6.8 2.26 -4.07 -1.41 1.93 -9.41 - - -6.64 - - - 3.02 -4.94 - -1.92 - - -
1.14 2.96 -1.81 1.82 0.26 -1.45 2.12 -4.18 - - - -4.57 - -1.82 -0.54 -1.59 -3.07 -1.69 0.03 4.23 - -4.37 -3.95 -3.49 -4.34 -5.97 -4.06 - -5.31 -4.68 0.45 -6.13 -5.15 -5.17 2.1 - - -1.52 -2.97 - - -2.93 - - - - - -
-0.85 0.87 -1.84 -3.4 -2.31 -1.76 -2.32 -5.2 -5.85 0.04 -8.56 -5.16 -2.04 0.77 0.46 0.73 0.14 -0.08 -0.71 1.48 0.03 0.93 1.28 0.18 -2.52 0.56 -1.06 0.79 -0.17 -3.11 0.22 0.02 -0.23 -0.11 1.2 0.66 0.69 1.12 0.08 -3.07 -3.07 -2.16 -1.46 -1.2 -1.08 2.62 -0.16 -2.38
-3.86 -0.36 - - - - - - - - - - - -0.64 -0.19 -0.36 -1.17 -1.24 -1.34 -1.15 2.13 0.39 0.29 0.79 -5.78 -0.03 -0.99 - -4.87 - -2.43 -0.21 -0.89 0.21 -0.68 3.01 -2.43 0.49 -2.6 - - 3.08 2.52 -3.26 1.59 1.04 - -1.24
1.55 -3.25 - -0.87 - -0.44 - 0.09 1.02 -0.94 -0.03 3.84 -0.12 - 2.7 - - - 3.84 -1.18 - - - -6.47 -0.22 -3.04 - - - -2.76 - -2.96 - - -3.09 -0.95 - -2.97 - - - - - - -0.86 - - -
-4.05 -3.25 -2.68 - - - -2.35 - -2.54 -2.96 - - - - - -0.56 -1.7 0.13 5.16 1.38 -2.56 0.74 -1.58 -1.49 -0.39 -2.15 - - - - -1.49 -1.37 -1.22 -3.17 -3.84 - -0.88 -1.54 - - - - - - 0.06 - - -
AT5G65350 (HTR11)
-0.94 1.81 -0.17 -1.57 -0.1 -1.38 -1.12 -4.27 - -7.53 - -4.47 -5.46 0.53 -0.26 -0.6 -0.28 0.24 -1.17 2.82 -1.07 0.1 1.04 -1.03 -3.26 -1.43 -3.15 3.27 -2.78 -3.13 1.44 -1.03 -1.57 -1.91 0.66 -1.43 -1.49 -0.12 -2.44 - - -2.61 0.13 0.89 -0.61 -0.3 -0.04 0.07
ATMG00370 (ORF199)
-4.49 -4.79 - 3.93 - - 4.55 -4.74 -1.45 -6.74 -2.08 - - - 1.86 -3.63 -3.18 -2.1 -2.4 -3.18 -3.42 -3.48 -6.79 -2.08 -31.89 -2.41 - -24.95 0.04 -2.14 -2.36 -2.25 -0.88 -4.16 -2.2 -12.28 -1.61 -2.91 -7.18 -1.75 -1.91 - -5.78 - -5.75 - - -5.93

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.