1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G55560

AT3G55560 (AHL15, AGF2)


Aliases : AHL15, AGF2

Description : AT-hook protein of GA feedback 2


Gene families : OG0000325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55560

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00257450 AHL20,... AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
AMTR_s00135p00017880 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 17... 0.06 OrthoFinder output from all 47 species
AT2G35270 GIK Predicted AT-hook DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT2G45430 AHL22 AT-hook motif nuclear-localized protein 22 0.03 OrthoFinder output from all 47 species
AT3G60870 AHL18 AT-hook motif nuclear-localized protein 18 0.04 OrthoFinder output from all 47 species
AT4G17800 No alias Predicted AT-hook DNA-binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g011771 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055781 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058662 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067031 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g078656 No alias AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086623 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22543 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23177 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26160 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16583 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29083 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64278 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40424.t1 AHL22, Aspi01Gene40424 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44753.t1 Aspi01Gene44753 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67181.t1 Aspi01Gene67181 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037284 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G059000.1 Ceric.26G059000 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G019000.1 Ceric.38G019000 AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g25287 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25872 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42758 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26108 AHL20 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27436 No alias AHL clade-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g29218 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013202001 No alias AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os02g48320.3 AHL27, ORE7,... AT-hook motif nuclear-localized protein 25... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16350.1 AHL22, LOC_Os03g16350 AT-hook motif nuclear-localized protein 22... 0.05 OrthoFinder output from all 47 species
LOC_Os04g50030.1 LOC_Os04g50030 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os06g04540.1 LOC_Os06g04540 AT-hook motif nuclear-localized protein 24... 0.03 OrthoFinder output from all 47 species
LOC_Os06g22100.2 AHL22, LOC_Os06g22100 AT-hook motif nuclear-localized protein 24... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44910.1 AHL20, LOC_Os08g44910 AT-hook motif nuclear-localized protein 20... 0.02 OrthoFinder output from all 47 species
Len_g25966 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g34111 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_12232g0010 No alias AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
MA_19068g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
MA_2055g0010 No alias AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
MA_291092g0010 AHL20 AT-hook motif nuclear-localized protein 20... 0.04 OrthoFinder output from all 47 species
MA_41289g0010 GIK AT-hook motif nuclear-localized protein 17... 0.04 OrthoFinder output from all 47 species
MA_77661g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_90407g0010 AHL22 AT-hook motif nuclear-localized protein 22... 0.02 OrthoFinder output from all 47 species
Mp7g18120.1 AHL20 AT-hook motif nuclear-localized protein 20... 0.03 OrthoFinder output from all 47 species
Msp_g12905 GIK AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25533 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07778 No alias AHL clade-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29204 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14039 AHL22 AHL clade-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28224 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19085 No alias AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43187 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04665 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20885 AHL22 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05146 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g38879 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49267 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005976 No alias AHL clade-A transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc06g060500.1.1 Solyc06g060500 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Solyc07g056300.1.1 Solyc07g056300 AT-hook motif nuclear-localized protein 16... 0.03 OrthoFinder output from all 47 species
Solyc08g007560.3.1 AHL22, Solyc08g007560 AT-hook motif nuclear-localized protein 22... 0.04 OrthoFinder output from all 47 species
Solyc08g077010.1.1 Solyc08g077010 AT-hook motif nuclear-localized protein 23... 0.04 OrthoFinder output from all 47 species
Solyc08g079720.3.1 AHL22, Solyc08g079720 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species
Solyc12g087950.1.1 Solyc12g087950 AT-hook motif nuclear-localized protein 17... 0.08 OrthoFinder output from all 47 species
Spa_g38567 AHL20 AHL clade-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21508 No alias AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37218 AHL22 AHL clade-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001193_P001 AHL20, Zm00001e001193 AT-hook motif nuclear-localized protein 22... 0.04 OrthoFinder output from all 47 species
Zm00001e007105_P001 Zm00001e007105 AT-hook motif nuclear-localized protein 23... 0.02 OrthoFinder output from all 47 species
Zm00001e009975_P001 Zm00001e009975 AT-hook motif nuclear-localized protein 17... 0.03 OrthoFinder output from all 47 species
Zm00001e021704_P001 Zm00001e021704 AT-hook motif nuclear-localized protein 23... 0.04 OrthoFinder output from all 47 species
Zm00001e024863_P001 AHL22, Zm00001e024863 AT-hook motif nuclear-localized protein 23... 0.03 OrthoFinder output from all 47 species
Zm00001e036564_P001 AHL22, Zm00001e036564 AT-hook motif nuclear-localized protein 22... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
BP GO:0007143 female meiotic nuclear division IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010165 response to X-ray IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 117 228
No external refs found!