AT3G54300 (VAMP727, ATVAMP727)

Aliases : VAMP727, ATVAMP727

Description : vesicle-associated membrane protein 727

Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G54300

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00031p00183990	VAMP727,...	Vesicle trafficking.SNARE target membrane recognition...	0.03	OrthoFinder output from all 47 species
Adi_g012928	ATVAMP725, VAMP725	R-type VAMP7-group component of SNARE longin membrane...	0.02	OrthoFinder output from all 47 species
Aev_g35641	ATVAMP725, VAMP725	R-type VAMP7-group component of SNARE longin membrane...	0.02	OrthoFinder output from all 47 species
Ala_g01359	VAMP727, ATVAMP727	R-type VAMP7-group component of SNARE longin membrane...	0.05	OrthoFinder output from all 47 species
Aop_g11465	VAMP727, ATVAMP727	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009713	ATVAMP721,...	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Azfi_s0064.g035436	ATVAMP721,...	non-SNARE-type phytolongin & original description: CDS=304-1083	0.03	OrthoFinder output from all 47 species
Cba_g69182	ATVAMP725, VAMP725	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Ceric.27G008700.1	VAMP727,...	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Ceric.36G052600.1	ATVAMP725,...	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Cre04.g225850	VAMP727, ATVAMP727	Vesicle trafficking.SNARE target membrane recognition...	0.01	OrthoFinder output from all 47 species
Cre04.g225900	ATVAMP725, VAMP725	Vesicle trafficking.SNARE target membrane recognition...	0.04	OrthoFinder output from all 47 species
LOC_Os03g58840.1	ATVAMP721,...	R-SNARE component VAMP721/VAMP722 of SNARE cell-plate...	0.05	OrthoFinder output from all 47 species
LOC_Os07g09600.1	ATVAMP725,...	R-SNARE component VAMP721/VAMP722 of SNARE cell-plate...	0.02	OrthoFinder output from all 47 species
LOC_Os08g44430.2	VAMP727,...	VAMP7-type R-type SNARE longin protein	0.03	OrthoFinder output from all 47 species
Msp_g02681	ATVAMP721,...	R-type VAMP7-group component of SNARE longin membrane...	0.02	OrthoFinder output from all 47 species
Msp_g07629	VAMP727, ATVAMP727	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Pir_g13299	VAMP727, ATVAMP727	R-type VAMP7-group component of SNARE longin membrane...	0.04	OrthoFinder output from all 47 species
Sam_g28378	No alias	R-type VAMP7-group component of SNARE longin membrane...	0.04	OrthoFinder output from all 47 species
Sam_g38843	No alias	R-type VAMP7-group component of SNARE longin membrane...	0.03	OrthoFinder output from all 47 species
Solyc01g066940.3.1	ATVAMP725,...	R-SNARE component VAMP721/VAMP722 of SNARE cell-plate...	0.02	OrthoFinder output from all 47 species
Solyc02g069150.3.1	ATVAMP721,...	R-SNARE component VAMP721/VAMP722 of SNARE cell-plate...	0.09	OrthoFinder output from all 47 species
Solyc11g006780.2.1	VAMP727,...	VAMP7-type R-type SNARE longin protein	0.04	OrthoFinder output from all 47 species
Zm00001e003924_P002	VAMP727,...	VAMP7-type R-type SNARE longin protein	0.06	OrthoFinder output from all 47 species
Zm00001e033056_P001	ATVAMP721,...	R-SNARE component VAMP721/VAMP722 of SNARE cell-plate...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005768	endosome	TAS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006623	protein targeting to vacuole	IMP	Interproscan
BP	GO:0006623	protein targeting to vacuole	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007033	vacuole organization	IMP	Interproscan
BP	GO:0007033	vacuole organization	RCA	Interproscan
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	ISS	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0031201	SNARE complex	IPI	Interproscan
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072665	protein localization to vacuole	None	Extended
BP	GO:0072666	establishment of protein localization to vacuole	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0005048	signal sequence binding	IEP	HCCA
MF	GO:0005483	soluble NSF attachment protein activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006896	Golgi to vacuole transport	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
CC	GO:0008540	proteasome regulatory particle, base subcomplex	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
MF	GO:0009940	amino-terminal vacuolar sorting propeptide binding	IEP	HCCA
MF	GO:0010209	vacuolar sorting signal binding	IEP	HCCA
BP	GO:0010496	intercellular transport	IEP	HCCA
BP	GO:0010497	plasmodesmata-mediated intercellular transport	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016578	histone deubiquitination	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
MF	GO:0031491	nucleosome binding	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010908	Longin_dom	32	97
IPR001388	Synaptobrevin-like	148	234

External Links

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AT3G54300 (VAMP727, ATVAMP727)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation