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Description : RING/U-box superfamily protein
Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G53410 | |
| Cluster | HCCA: Cluster_77 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00175p00046030 | evm_27.TU.AmTr_v1... | Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G047100.1 | Ceric.36G047100 | E3 ubiquitin ligase *(LOG2/LUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08589 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11315 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g01692 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03008 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g11051 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02875 | No alias | E3 ubiquitin ligase *(LOG2/LUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031610_P001 | Zm00001e031610 | Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IDA | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000215 | tRNA 2'-phosphotransferase activity | IEP | HCCA |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| CC | GO:0005834 | heterotrimeric G-protein complex | IEP | HCCA |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006497 | protein lipidation | IEP | HCCA |
| BP | GO:0006498 | N-terminal protein lipidation | IEP | HCCA |
| BP | GO:0006499 | N-terminal protein myristoylation | IEP | HCCA |
| BP | GO:0006625 | protein targeting to peroxisome | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0007031 | peroxisome organization | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | HCCA |
| BP | GO:0010286 | heat acclimation | IEP | HCCA |
| BP | GO:0015919 | peroxisomal membrane transport | IEP | HCCA |
| MF | GO:0016207 | 4-coumarate-CoA ligase activity | IEP | HCCA |
| MF | GO:0016405 | CoA-ligase activity | IEP | HCCA |
| BP | GO:0016558 | protein import into peroxisome matrix | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | HCCA |
| MF | GO:0016878 | acid-thiol ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| BP | GO:0018377 | protein myristoylation | IEP | HCCA |
| MF | GO:0030544 | Hsp70 protein binding | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| BP | GO:0031365 | N-terminal protein amino acid modification | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0043574 | peroxisomal transport | IEP | HCCA |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
| BP | GO:0051259 | protein complex oligomerization | IEP | HCCA |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
| BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
| BP | GO:0072662 | protein localization to peroxisome | IEP | HCCA |
| BP | GO:0072663 | establishment of protein localization to peroxisome | IEP | HCCA |
| CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:1905360 | GTPase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |