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Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G52561 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G11600 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G06270 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g46838 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0019.g015061 | No alias | not classified & original description: CDS=1-939 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0272.g061239 | No alias | not classified & original description: CDS=73-1257 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011000 | No alias | not classified & original description: CDS=157-1332 | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004451 | isocitrate lyase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0010162 | seed dormancy process | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | HCCA |
| BP | GO:0022611 | dormancy process | IEP | HCCA |
| BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |