AT3G51040 (RTH)

Aliases : RTH

Description : RTE1-homolog

Gene families : OG0001942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001942_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G51040

Target	Alias	Description	ECC score	Gene Family Method
Aev_g02977	RTH	regulatory protein *(RTE/RTH) of ethylene receptor...	0.02	OrthoFinder output from all 47 species
Dcu_g08558	RTE1	regulatory protein *(RTE/RTH) of ethylene receptor...	0.03	OrthoFinder output from all 47 species
LOC_Os01g51430.1	RTE1, LOC_Os01g51430	Protein REVERSION-TO-ETHYLENE SENSITIVITY1...	0.03	OrthoFinder output from all 47 species
Pir_g06175	RTH	regulatory protein *(RTE/RTH) of ethylene receptor...	0.03	OrthoFinder output from all 47 species
Zm00001e032270_P001	RTE1, Zm00001e032270	Protein REVERSION-TO-ETHYLENE SENSITIVITY1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006661	phosphatidylinositol biosynthetic process	RCA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0045017	glycerolipid biosynthetic process	None	Extended
BP	GO:0046474	glycerophospholipid biosynthetic process	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046488	phosphatidylinositol metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008496	TMEM222/RTE1	38	94
IPR008496	TMEM222/RTE1	101	175

External Links

No external refs found!

AT3G51040 (RTH)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation