AT3G50070 (CYCD3;3)

Aliases : CYCD3;3

Description : CYCLIN D3;3

Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G50070

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00074880	CYCD6;1,...	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.02	OrthoFinder output from all 47 species
AMTR_s00135p00066200	ATCYCD2;1,...	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.07	OrthoFinder output from all 47 species
AMTR_s00190p00017930	ATCYCD2;1,...	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.04	OrthoFinder output from all 47 species
Aev_g01039	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aev_g09917	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Als_g01667	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Als_g47164	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aop_g12696	CYCD3;3	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g18668	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g31334	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g35995	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aop_g68494	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene51365.t1	CYCD1;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene60777.t1	CYCD1;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene67685.t1	CYCD1;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene72055.t1	CYCD3, CYCD3;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Cba_g00990	CYCD3;3	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Cba_g03303	CYCD3, CYCD3;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Cba_g16891	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ceric.08G064300.1	CYCD3;2, Ceric.08G064300	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ceric.09G017400.1	CYCD1;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ceric.10G062700.1	CYCD1;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ceric.1Z120100.1	CYCD1;1,...	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Dac_g11389	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dcu_g07032	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dcu_g18290	CYCD3, CYCD3;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01000226001	CYCD3;3	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.04	OrthoFinder output from all 47 species
GSVIVT01003175001	CYCD3;3	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.03	OrthoFinder output from all 47 species
GSVIVT01003610001	ATCYCD2;1, CYCD2;1	Cell cycle.regulation.cyclins.CYCD-type cyclin	0.07	OrthoFinder output from all 47 species
Gb_03361	CYCD3, CYCD3;1	cyclin (CYCD)	0.03	OrthoFinder output from all 47 species
LOC_Os03g42070.1	CYCD5;1, LOC_Os03g42070	cyclin (CYCD)	0.03	OrthoFinder output from all 47 species
LOC_Os07g37010.1	CYCD6;1, LOC_Os07g37010	cyclin (CYCD)	0.03	OrthoFinder output from all 47 species
LOC_Os09g02360.1	CYCD3;3, LOC_Os09g02360	cyclin (CYCD)	0.02	OrthoFinder output from all 47 species
LOC_Os09g21450.1	CYCD1;1,...	cyclin (CYCD)	0.07	OrthoFinder output from all 47 species
Len_g20623	CYCD3, CYCD3;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Len_g55932	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.06	OrthoFinder output from all 47 species
MA_103834g0010	CYCD1;1, ATCYCD1;1	cyclin (CYCD)	0.03	OrthoFinder output from all 47 species
MA_114375g0010	CYCD1;1, ATCYCD1;1	cyclin (CYCD)	0.05	OrthoFinder output from all 47 species
Msp_g10139	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Nbi_g07386	CYCD3, CYCD3;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Nbi_g13351	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Ore_g36210	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ore_g37998	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010523	ATCYCD2;1, CYCD2;1	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020437	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Sam_g16646	No alias	regulatory protein *(CYCD) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Solyc07g054950.2.1	CYCD6;1, Solyc07g054950	cyclin (CYCD)	0.03	OrthoFinder output from all 47 species
Spa_g38227	CYCD1;1, ATCYCD1;1	regulatory protein *(CYCD) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Tin_g00808	CYCD3;3	regulatory protein *(CYCD) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Zm00001e003084_P002	CYCD1;1,...	cyclin (CYCD)	0.05	OrthoFinder output from all 47 species
Zm00001e034405_P005	ATCYCD2;1,...	cyclin (CYCD)	0.05	OrthoFinder output from all 47 species
Zm00001e035215_P001	CYCD6;1, Zm00001e035215	cyclin (CYCD)	0.03	OrthoFinder output from all 47 species
Zm00001e035575_P002	ATCYCD2;1,...	cyclin (CYCD)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	None	Extended
BP	GO:0000278	mitotic cell cycle	RCA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001933	negative regulation of protein phosphorylation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	None	Extended
BP	GO:0006469	negative regulation of protein kinase activity	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010440	stomatal lineage progression	RCA	Interproscan
BP	GO:0010563	negative regulation of phosphorus metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033673	negative regulation of kinase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042127	regulation of cell population proliferation	IGI	Interproscan
BP	GO:0042127	regulation of cell population proliferation	RCA	Interproscan
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042326	negative regulation of phosphorylation	None	Extended
BP	GO:0043086	negative regulation of catalytic activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	RCA	Interproscan
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0045936	negative regulation of phosphate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048316	seed development	IGI	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051348	negative regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	ISS	Interproscan
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097472	cyclin-dependent protein kinase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006671	Cyclin_N	84	185
IPR004367	Cyclin_C-dom	188	297

External Links

No external refs found!

AT3G50070 (CYCD3;3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation