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AT3G49810


Description : ARM repeat superfamily protein


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G49810

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00257160 PUB26,... U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aob_g08904 PUB26 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11323 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10378 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12799 PUB29, ATPUB29 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002717 PUB26 not classified & original description: CDS=1-1404 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015794 PUB26 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Spa_g30474 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07009 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 64 134
No external refs found!