Aliases : ABCA4, ATATH3
Description : ATP binding cassette subfamily A4
Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G47750 | |
Cluster | HCCA: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00138290 | ATATH6, ATH6,... | Solute transport.primary active transport.ABC... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00078p00139590 | ATH16, ATATH16,... | ABC transporter A family member 12 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT3G47740 | ATATH2, ATH2, ABCA3 | ABC2 homolog 2 | 0.04 | OrthoFinder output from all 47 species | |
AT3G47770 | ATH5, ATATH5, ABCA6 | ABC2 homolog 5 | 0.05 | OrthoFinder output from all 47 species | |
AT3G47780 | ATATH6, ATH6 | ABC2 homolog 6 | 0.04 | OrthoFinder output from all 47 species | |
Aop_g04431 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.18G061500.1 | ATATH6, ATH6,... | subfamily ABCA transporter & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000057.67 | ATATH4, ABCA5, ATH4 | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01008040001 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025902001 | ATH7, ATATH7 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g11960.1 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g17586 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g10749 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo171117 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Smo268954 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g113040.4.1 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g070920.3.1 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g070930.3.1 | ATATH6, ATH6,... | ABC transporter A family member 3 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e014485_P003 | ATH7, ATATH7,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014489_P004 | ATATH14, ATH14,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | ISS | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000103 | sulfate assimilation | IEP | HCCA |
MF | GO:0000257 | nitrilase activity | IEP | HCCA |
BP | GO:0002213 | defense response to insect | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003933 | GTP cyclohydrolase activity | IEP | HCCA |
MF | GO:0003935 | GTP cyclohydrolase II activity | IEP | HCCA |
MF | GO:0004604 | phosphoadenylyl-sulfate reductase (thioredoxin) activity | IEP | HCCA |
MF | GO:0004712 | protein serine/threonine/tyrosine kinase activity | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0008422 | beta-glucosidase activity | IEP | HCCA |
MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
CC | GO:0009532 | plastid stroma | IEP | HCCA |
CC | GO:0009570 | chloroplast stroma | IEP | HCCA |
BP | GO:0009625 | response to insect | IEP | HCCA |
MF | GO:0009973 | adenylyl-sulfate reductase activity | IEP | HCCA |
BP | GO:0010052 | guard cell differentiation | IEP | HCCA |
BP | GO:0010119 | regulation of stomatal movement | IEP | HCCA |
MF | GO:0015926 | glucosidase activity | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0016815 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles | IEP | HCCA |
MF | GO:0016829 | lyase activity | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
MF | GO:0018822 | nitrile hydratase activity | IEP | HCCA |
MF | GO:0019137 | thioglucosidase activity | IEP | HCCA |
MF | GO:0019238 | cyclohydrolase activity | IEP | HCCA |
BP | GO:0019379 | sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | IEP | HCCA |
BP | GO:0019419 | sulfate reduction | IEP | HCCA |
BP | GO:0019499 | cyanide metabolic process | IEP | HCCA |
BP | GO:0019759 | glycosinolate catabolic process | IEP | HCCA |
BP | GO:0019762 | glucosinolate catabolic process | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044273 | sulfur compound catabolic process | IEP | HCCA |
BP | GO:0045595 | regulation of cell differentiation | IEP | HCCA |
BP | GO:0045597 | positive regulation of cell differentiation | IEP | HCCA |
MF | GO:0047427 | cyanoalanine nitrilase activity | IEP | HCCA |
MF | GO:0047558 | 3-cyanoalanine hydratase activity | IEP | HCCA |
BP | GO:0051094 | positive regulation of developmental process | IEP | HCCA |
BP | GO:0051302 | regulation of cell division | IEP | HCCA |
BP | GO:0051410 | detoxification of nitrogen compound | IEP | HCCA |
BP | GO:0051782 | negative regulation of cell division | IEP | HCCA |
MF | GO:0080061 | indole-3-acetonitrile nitrilase activity | IEP | HCCA |
BP | GO:0080167 | response to karrikin | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003439 | ABC_transporter-like_ATP-bd | 649 | 791 |
No external refs found! |