AT3G47750 (ABCA4, ATATH3)


Aliases : ABCA4, ATATH3

Description : ATP binding cassette subfamily A4


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47750
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00138290 ATATH6, ATH6,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00078p00139590 ATH16, ATATH16,... ABC transporter A family member 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G47740 ATATH2, ATH2, ABCA3 ABC2 homolog 2 0.04 OrthoFinder output from all 47 species
AT3G47770 ATH5, ATATH5, ABCA6 ABC2 homolog 5 0.05 OrthoFinder output from all 47 species
AT3G47780 ATATH6, ATH6 ABC2 homolog 6 0.04 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G061500.1 ATATH6, ATH6,... subfamily ABCA transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.67 ATATH4, ABCA5, ATH4 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
GSVIVT01008040001 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01025902001 ATH7, ATATH7 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os02g11960.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Pnu_g17586 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10749 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc03g113040.4.1 ATATH6, ATH6,... subfamily ABCA transporter 0.05 OrthoFinder output from all 47 species
Solyc06g070920.3.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Solyc06g070930.3.1 ATATH6, ATH6,... ABC transporter A family member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e014485_P003 ATH7, ATATH7,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Zm00001e014489_P004 ATATH14, ATH14,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP HCCA
MF GO:0000257 nitrilase activity IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003933 GTP cyclohydrolase activity IEP HCCA
MF GO:0003935 GTP cyclohydrolase II activity IEP HCCA
MF GO:0004604 phosphoadenylyl-sulfate reductase (thioredoxin) activity IEP HCCA
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008422 beta-glucosidase activity IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009625 response to insect IEP HCCA
MF GO:0009973 adenylyl-sulfate reductase activity IEP HCCA
BP GO:0010052 guard cell differentiation IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
MF GO:0015926 glucosidase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016815 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0018822 nitrile hydratase activity IEP HCCA
MF GO:0019137 thioglucosidase activity IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0019379 sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) IEP HCCA
BP GO:0019419 sulfate reduction IEP HCCA
BP GO:0019499 cyanide metabolic process IEP HCCA
BP GO:0019759 glycosinolate catabolic process IEP HCCA
BP GO:0019762 glucosinolate catabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
MF GO:0047427 cyanoalanine nitrilase activity IEP HCCA
MF GO:0047558 3-cyanoalanine hydratase activity IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051410 detoxification of nitrogen compound IEP HCCA
BP GO:0051782 negative regulation of cell division IEP HCCA
MF GO:0080061 indole-3-acetonitrile nitrilase activity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 649 791
No external refs found!