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  5. AT3G47740

AT3G47740 (ATATH2, ATH2, ABCA3)


Aliases : ATATH2, ATH2, ABCA3

Description : ABC2 homolog 2


Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G47740
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT3G47750 ABCA4, ATATH3 ATP binding cassette subfamily A4 0.04 OrthoFinder output from all 47 species
AT3G47780 ATATH6, ATH6 ABC2 homolog 6 0.03 OrthoFinder output from all 47 species
AT3G47790 ATH7, ATATH7 ABC2 homolog 7 0.05 OrthoFinder output from all 47 species
AT5G61700 ATH16, ATATH16 ABC2 homolog 16 0.04 OrthoFinder output from all 47 species
Als_g38161 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04431 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37696.t1 ATH16, ATATH16,... subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016229 ATATH6, ATH6 subfamily ABCA transporter & original description: CDS=234-3275 0.05 OrthoFinder output from all 47 species
Dac_g07523 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g01820.1 ATH16, ATATH16,... subfamily ABCA transporter 0.02 OrthoFinder output from all 47 species
LOC_Os08g30770.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
LOC_Os08g30780.1 ATATH6, ATH6,... subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Mp7g18420.1 ATH7, ATATH7 subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Ppi_g10749 ATATH6, ATH6 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo171117 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Smo268954 ATATH6, ATH6 Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
Solyc03g113040.4.1 ATATH6, ATH6,... subfamily ABCA transporter 0.07 OrthoFinder output from all 47 species
Solyc06g070930.3.1 ATATH6, ATH6,... ABC transporter A family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014485_P003 ATH7, ATATH7,... subfamily ABCA transporter 0.04 OrthoFinder output from all 47 species
Zm00001e022344_P001 ATATH6, ATH6,... subfamily ABCA transporter 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0008526 phosphatidylinositol transfer activity IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048766 root hair initiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:0120014 phospholipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 634 776
No external refs found!