AT3G47730 (ATH1, ATATH1, ABCA2)

Aliases : ATH1, ATATH1, ABCA2

Description : ATP-binding cassette A2

Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G47730

Target	Alias	Description	ECC score	Gene Family Method
Dac_g10442	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g20236	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02291	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g20090.1	ABCA1, AtABCA1	subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Mp7g18500.1	ATH1, ATATH1, ABCA2	fatty acid transporter (ABCA). subfamily ABCA transporter	0.02	OrthoFinder output from all 47 species
Msp_g36286	ATH15, ATATH15	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g40904	ABCA1, AtABCA1	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g08285	ATH1, ATATH1, ABCA2	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	ISS	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	547	692

External Links

No external refs found!