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  5. AT3G46190

AT3G46190


Description : TRAF-like family protein


Gene families : OG0008618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G46190

Target Alias Description ECC score Gene Family Method Actions
AT3G20370 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT3G22085 No alias No description available 0.02 OrthoFinder output from all 47 species
AT4G09770 No alias TRAF-like family protein 0.05 OrthoFinder output from all 47 species
AT4G09780 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT5G26260 No alias TRAF-like family protein 0.03 OrthoFinder output from all 47 species
AT5G26280 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species
AT5G26320 No alias TRAF-like family protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 44 136
IPR002083 MATH/TRAF_dom 168 281
No external refs found!