1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G44450

AT3G44450


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0003074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003074_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G44450

Target Alias Description ECC score Gene Family Method Actions
Ala_g38826 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Ala_g38827 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.06 OrthoFinder output from all 47 species
Ala_g39106 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.02 OrthoFinder output from all 47 species
Als_g45623 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Aop_g46401 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene01351.t1 Aspi01Gene01351 regulatory protein *(BIC) of cryptochrome signalling &... 0.04 OrthoFinder output from all 47 species
Dac_g19476 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.07 OrthoFinder output from all 47 species
Dac_g31761 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Dac_g36707 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Dcu_g00412 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.06 OrthoFinder output from all 47 species
LOC_Os04g33610.1 LOC_Os04g33610 Protein BIC1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g58327 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.02 OrthoFinder output from all 47 species
Ppi_g16249 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Ppi_g17963 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.03 OrthoFinder output from all 47 species
Ppi_g47195 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013813 No alias regulatory protein *(BIC) of cryptochrome signalling &... 0.02 OrthoFinder output from all 47 species
Zm00001e014726_P001 Zm00001e014726 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
CC GO:0016607 nuclear speck IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
CC GO:0042579 microbody IEP HCCA

No InterPro domains available for this sequence

No external refs found!