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  5. AT3G43710

AT3G43710


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0005233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G43710
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G61540 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G20380 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G09750 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G25710 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.07 OrthoFinder output from all 47 species
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39750 No alias F-box family protein-related 0.07 OrthoFinder output from all 47 species
AT4G39753 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005768 endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 26 67
IPR006652 Kelch_1 124 159
IPR006652 Kelch_1 165 209
No external refs found!