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AT3G28857


Description : basic helix-loop-helix (bHLH) DNA-binding family protein


Gene families : OG0009654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28857

Target Alias Description ECC score Gene Family Method Actions
AT3G47710 BNQ3, BHLH161 BANQUO 3 0.04 OrthoFinder output from all 47 species
GSVIVT01011380001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51320.1 LOC_Os02g51320 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os03g07540.1 LOC_Os03g07540 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os11g39000.1 ATBS1, TMO7,... transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_148495g0010 KDR transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
MA_156285g0010 KDR transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
MA_9119217g0010 KDR transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc02g067380.4.1 KDR, Solyc02g067380 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e000536_P001 KDR, Zm00001e000536 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009638 phototropism IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0022622 root system development IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0080086 stamen filament development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 22 60
No external refs found!