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AT3G28550


Description : Proline-rich extensin-like family protein


Gene families : OG0020007 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28550
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Solyc09g098510.3.1 Solyc09g098510 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g098800.2.1 Solyc12g098800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
CC GO:0042807 central vacuole IEP HCCA
InterPro domains Description Start Stop
IPR006706 Extensin_dom 809 858
IPR006706 Extensin_dom 242 291
IPR006706 Extensin_dom 909 958
IPR006706 Extensin_dom 267 316
IPR006706 Extensin_dom 834 883
IPR006706 Extensin_dom 684 733
IPR006706 Extensin_dom 417 466
IPR006706 Extensin_dom 467 516
IPR006706 Extensin_dom 392 441
IPR006706 Extensin_dom 709 758
IPR006706 Extensin_dom 567 616
IPR006706 Extensin_dom 192 241
IPR006706 Extensin_dom 934 983
IPR006706 Extensin_dom 884 933
IPR006706 Extensin_dom 542 591
IPR006706 Extensin_dom 517 566
IPR006706 Extensin_dom 784 833
IPR006706 Extensin_dom 442 491
IPR006706 Extensin_dom 367 416
IPR006706 Extensin_dom 92 141
IPR006706 Extensin_dom 759 808
IPR006706 Extensin_dom 859 908
IPR006706 Extensin_dom 342 391
IPR006706 Extensin_dom 167 216
IPR006706 Extensin_dom 117 166
IPR006706 Extensin_dom 492 541
IPR006706 Extensin_dom 142 191
IPR006706 Extensin_dom 68 116
IPR006706 Extensin_dom 734 783
IPR006706 Extensin_dom 659 708
IPR006706 Extensin_dom 317 366
IPR006706 Extensin_dom 292 341
No external refs found!