AT3G28520

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28520
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00111720	evm_27.TU.AmTr_v1...	AAA-ATPase At3g50940 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
AT2G18190	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	OrthoFinder output from all 47 species
AT4G05340	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	OrthoFinder output from all 47 species
AT5G17730	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	OrthoFinder output from all 47 species
Aop_g12978	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g36939	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30040.t1	Aspi01Gene30040	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0019.g015104	No alias	not classified & original description: CDS=1-1578	0.01	OrthoFinder output from all 47 species
Cba_g04601	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g08189	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g01247	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03684	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g23306	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008088001	No alias	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01010371001	BCS1	AAA-ATPase At5g17760 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01032557001	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os07g09470.1	LOC_Os07g09470	AAA-ATPase At3g28610 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
LOC_Os12g28590.1	AATP1, LOC_Os12g28590	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os12g44190.1	AATP1, LOC_Os12g44190	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
MA_344969g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_354707g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_86564g0010	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Msp_g33481	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03672	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo422466	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Spa_g42317	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e012527_P001	Zm00001e012527	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e027961_P001	Zm00001e027961	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e034224_P001	Zm00001e034224	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
CC	GO:0030054	cell junction	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004029	aldehyde dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0004031	aldehyde oxidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
MF	GO:0005355	glucose transmembrane transporter activity	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006349	regulation of gene expression by genomic imprinting	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009646	response to absence of light	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009960	endosperm development	IEP	HCCA
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	HCCA
MF	GO:0015119	hexose phosphate transmembrane transporter activity	IEP	HCCA
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015149	hexose transmembrane transporter activity	IEP	HCCA
MF	GO:0015152	glucose-6-phosphate transmembrane transporter activity	IEP	HCCA
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	HCCA
BP	GO:0015712	hexose phosphate transport	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016707	gibberellin 3-beta-dioxygenase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0018479	benzaldehyde dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0018488	aryl-aldehyde oxidase activity	IEP	HCCA
MF	GO:0019115	benzaldehyde dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
CC	GO:0043076	megasporocyte nucleus	IEP	HCCA
CC	GO:0043078	polar nucleus	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
BP	GO:0048317	seed morphogenesis	IEP	HCCA
MF	GO:0050362	L-tryptophan:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0051119	sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0051645	Golgi localization	IEP	HCCA
BP	GO:0051646	mitochondrion localization	IEP	HCCA
BP	GO:0060151	peroxisome localization	IEP	HCCA
MF	GO:0070529	L-tryptophan aminotransferase activity	IEP	HCCA
BP	GO:0080022	primary root development	IEP	HCCA
MF	GO:0080097	L-tryptophan:pyruvate aminotransferase activity	IEP	HCCA
BP	GO:0080113	regulation of seed growth	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA
BP	GO:2000014	regulation of endosperm development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	15	113
IPR003959	ATPase_AAA_core	232	377

External Links

No external refs found!

AT3G28520

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation