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  5. AT3G27170

AT3G27170 (ATCLC-B, CLC-B)


Aliases : ATCLC-B, CLC-B

Description : chloride channel B


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233520 CLC-A, ATCLC-A,... Chloride channel protein CLC-a OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00013p00233550 ATCLC-B, CLC-B,... Solute transport.carrier-mediated transport.CLC anion... 0.05 OrthoFinder output from all 47 species
Aev_g05149 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aev_g41935 ATCLC-B, CLC-B anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Ala_g10966 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Aob_g03530 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Aob_g14150 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39433.t1 Aspi01Gene39433 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G063300.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.05 OrthoFinder output from all 47 species
Dac_g44574 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Dcu_g12890 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01012828001 No alias Solute transport.carrier-mediated transport.CLC anion... 0.08 OrthoFinder output from all 47 species
GSVIVT01033108001 ATCLC-B, CLC-B Solute transport.carrier-mediated transport.CLC anion... 0.05 OrthoFinder output from all 47 species
LOC_Os08g20570.1 LOC_Os08g20570 anion channel / anion:proton antiporter (CLC) 0.05 OrthoFinder output from all 47 species
LOC_Os12g25200.1 ATCLC-B, CLC-B,... anion channel / anion:proton antiporter (CLC) 0.06 OrthoFinder output from all 47 species
Len_g27812 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species
Len_g44129 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Msp_g07699 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Pir_g14943 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Solyc01g103140.3.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Solyc02g068080.3.1 ATCLC-B, CLC-B,... anion channel / anion:proton antiporter (CLC) 0.04 OrthoFinder output from all 47 species
Spa_g39978 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity ISS Interproscan
MF GO:0005253 monoatomic anion channel activity ISS Interproscan
CC GO:0005622 intracellular anatomical structure TAS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006821 chloride transport ISS Interproscan
MF GO:0009671 nitrate:proton symporter activity IDA Interproscan
CC GO:0009705 plant-type vacuole membrane IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009624 response to nematode IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0015837 amine transport IEP HCCA
BP GO:0015843 methylammonium transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019755 one-carbon compound transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 710 761
IPR001807 Cl-channel_volt-gated 142 556
No external refs found!